Protein–RNA interactions for Protein: Q5T2D3

OTUD3, OTU domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD3Q5T2D3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 AC011676.5-201ENST00000624864 2660 ntBASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 TSPY7P-201ENST00000431358 1114 ntBASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 SNORA78-201ENST00000459373 127 ntBASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 AC130371.2-201ENST00000619443 611 ntBASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 KRT8P11-201ENST00000409686 1436 ntBASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
OTUD3Q5T2D3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
OTUD3Q5T2D3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
OTUD3Q5T2D3 NKILA-202ENST00000614771 2598 ntBASIC17.08■□□□□ 0.33
OTUD3Q5T2D3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.08■□□□□ 0.33
OTUD3Q5T2D3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
OTUD3Q5T2D3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
OTUD3Q5T2D3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
OTUD3Q5T2D3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
OTUD3Q5T2D3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
OTUD3Q5T2D3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 KRT8P3-201ENST00000519669 1449 ntBASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 MESTP1-201ENST00000404287 994 ntBASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 AC008040.2-201ENST00000461049 708 ntBASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 AC116562.2-201ENST00000507042 360 ntBASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 AC093827.2-201ENST00000512654 315 ntBASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 PRSS44-201ENST00000515154 1146 ntBASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 AP003071.4-201ENST00000562276 1284 ntBASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 MIR4785-201ENST00000585005 73 ntBASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
OTUD3Q5T2D3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 REXO1L10P-201ENST00000615707 1290 ntBASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 REXO1L12P-201ENST00000622156 912 ntBASIC17.07■□□□□ 0.32
OTUD3Q5T2D3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms