Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPIN4Q56A73 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SPIN4Q56A73 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SPIN4Q56A73 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SPIN4Q56A73 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SPIN4Q56A73 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.21■□□□□ 0.34
SPIN4Q56A73 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.21■□□□□ 0.34
SPIN4Q56A73 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.21■□□□□ 0.34
SPIN4Q56A73 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPIN4Q56A73 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SPIN4Q56A73 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPIN4Q56A73 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SPIN4Q56A73 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPIN4Q56A73 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SPIN4Q56A73 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SPIN4Q56A73 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPIN4Q56A73 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPIN4Q56A73 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPIN4Q56A73 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
SPIN4Q56A73 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.2■□□□□ 0.34
SPIN4Q56A73 AL441883.1-201ENST00000566170 1045 ntBASIC17.2■□□□□ 0.34
SPIN4Q56A73 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.2■□□□□ 0.34
SPIN4Q56A73 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.2■□□□□ 0.34
SPIN4Q56A73 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPIN4Q56A73 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SPIN4Q56A73 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPIN4Q56A73 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.2■□□□□ 0.34
SPIN4Q56A73 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.2■□□□□ 0.34
SPIN4Q56A73 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SPIN4Q56A73 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
SPIN4Q56A73 AC020916.1-201ENST00000587762 1774 ntBASIC17.2■□□□□ 0.34
SPIN4Q56A73 AL391807.1-203ENST00000604392 2365 ntBASIC17.2■□□□□ 0.34
SPIN4Q56A73 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
SPIN4Q56A73 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.19■□□□□ 0.34
SPIN4Q56A73 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SPIN4Q56A73 TERF1P1-201ENST00000311003 1181 ntBASIC17.19■□□□□ 0.34
SPIN4Q56A73 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.19■□□□□ 0.34
SPIN4Q56A73 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.19■□□□□ 0.34
SPIN4Q56A73 STARP1-201ENST00000397973 869 ntBASIC17.19■□□□□ 0.34
SPIN4Q56A73 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.19■□□□□ 0.34
SPIN4Q56A73 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.19■□□□□ 0.34
SPIN4Q56A73 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SPIN4Q56A73 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.19■□□□□ 0.34
SPIN4Q56A73 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
SPIN4Q56A73 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.19■□□□□ 0.34
SPIN4Q56A73 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
SPIN4Q56A73 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
SPIN4Q56A73 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.19■□□□□ 0.34
SPIN4Q56A73 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SPIN4Q56A73 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.19■□□□□ 0.34
SPIN4Q56A73 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.18■□□□□ 0.34
SPIN4Q56A73 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPIN4Q56A73 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SPIN4Q56A73 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SPIN4Q56A73 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SPIN4Q56A73 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SPIN4Q56A73 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
SPIN4Q56A73 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SPIN4Q56A73 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SPIN4Q56A73 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.18■□□□□ 0.34
SPIN4Q56A73 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPIN4Q56A73 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.18■□□□□ 0.34
SPIN4Q56A73 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SPIN4Q56A73 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SPIN4Q56A73 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.18■□□□□ 0.34
SPIN4Q56A73 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SPIN4Q56A73 FAM8A6P-201ENST00000407496 1135 ntBASIC17.18■□□□□ 0.34
SPIN4Q56A73 KRT18P65-201ENST00000439811 1286 ntBASIC17.18■□□□□ 0.34
SPIN4Q56A73 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.18■□□□□ 0.34
SPIN4Q56A73 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.18■□□□□ 0.34
SPIN4Q56A73 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
SPIN4Q56A73 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.18■□□□□ 0.34
SPIN4Q56A73 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.18■□□□□ 0.34
SPIN4Q56A73 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SPIN4Q56A73 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.18■□□□□ 0.34
SPIN4Q56A73 AC116407.2-201ENST00000613639 860 ntBASIC17.18■□□□□ 0.34
SPIN4Q56A73 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SPIN4Q56A73 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SPIN4Q56A73 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.18■□□□□ 0.34
SPIN4Q56A73 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.18■□□□□ 0.34
SPIN4Q56A73 AC100803.2-201ENST00000562459 1963 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms