Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBXN1Q04323 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
UBXN1Q04323 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBXN1Q04323 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBXN1Q04323 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.73■□□□□ 0.75
UBXN1Q04323 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBXN1Q04323 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBXN1Q04323 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UBXN1Q04323 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.73■□□□□ 0.75
UBXN1Q04323 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.73■□□□□ 0.75
UBXN1Q04323 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.73■□□□□ 0.75
UBXN1Q04323 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBXN1Q04323 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBXN1Q04323 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBXN1Q04323 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBXN1Q04323 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBXN1Q04323 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBXN1Q04323 INGX-201ENST00000359239 846 ntBASIC19.73■□□□□ 0.75
UBXN1Q04323 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.73■□□□□ 0.75
UBXN1Q04323 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.73■□□□□ 0.75
UBXN1Q04323 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.73■□□□□ 0.75
UBXN1Q04323 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.73■□□□□ 0.75
UBXN1Q04323 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.73■□□□□ 0.75
UBXN1Q04323 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBXN1Q04323 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBXN1Q04323 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
UBXN1Q04323 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.73■□□□□ 0.75
UBXN1Q04323 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBXN1Q04323 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
UBXN1Q04323 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
UBXN1Q04323 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
UBXN1Q04323 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
UBXN1Q04323 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.72■□□□□ 0.75
UBXN1Q04323 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 SEC1P-202ENST00000473944 940 ntBASIC19.72■□□□□ 0.75
UBXN1Q04323 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.72■□□□□ 0.75
UBXN1Q04323 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.72■□□□□ 0.75
UBXN1Q04323 AL355075.4-201ENST00000554988 638 ntBASIC19.72■□□□□ 0.75
UBXN1Q04323 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
UBXN1Q04323 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
UBXN1Q04323 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 AC024243.1-201ENST00000609234 778 ntBASIC19.72■□□□□ 0.75
UBXN1Q04323 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
UBXN1Q04323 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
UBXN1Q04323 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.72■□□□□ 0.75
UBXN1Q04323 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBXN1Q04323 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.71■□□□□ 0.75
UBXN1Q04323 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
UBXN1Q04323 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
UBXN1Q04323 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
UBXN1Q04323 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.71■□□□□ 0.75
UBXN1Q04323 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.71■□□□□ 0.75
UBXN1Q04323 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.71■□□□□ 0.75
UBXN1Q04323 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
UBXN1Q04323 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.71■□□□□ 0.75
UBXN1Q04323 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
UBXN1Q04323 EGLN1P1-201ENST00000531623 762 ntBASIC19.71■□□□□ 0.75
UBXN1Q04323 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.71■□□□□ 0.75
UBXN1Q04323 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
UBXN1Q04323 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.71■□□□□ 0.75
UBXN1Q04323 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
UBXN1Q04323 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBXN1Q04323 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms