Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 AC093677.2-201ENST00000600169 1863 ntBASIC13.81□□□□□ -0.2
HIST1H1AQ02539 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 MIR3180-5-201ENST00000583743 153 ntBASIC13.81□□□□□ -0.2
HIST1H1AQ02539 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 Z99916.2-201ENST00000604037 246 ntBASIC13.81□□□□□ -0.2
HIST1H1AQ02539 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 AL513477.1-201ENST00000602865 2407 ntBASIC13.81□□□□□ -0.2
HIST1H1AQ02539 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST1H1AQ02539 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 AC036111.1-201ENST00000533973 1582 ntBASIC13.8□□□□□ -0.2
HIST1H1AQ02539 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 UNC93B2-201ENST00000285383 730 ntBASIC13.8□□□□□ -0.2
HIST1H1AQ02539 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 KRT18P41-201ENST00000518924 1277 ntBASIC13.8□□□□□ -0.2
HIST1H1AQ02539 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.8□□□□□ -0.2
HIST1H1AQ02539 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
HIST1H1AQ02539 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 AC008894.3-201ENST00000624324 3103 ntBASIC13.79□□□□□ -0.2
HIST1H1AQ02539 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 AC099343.3-201ENST00000605834 2503 ntBASIC13.79□□□□□ -0.2
HIST1H1AQ02539 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HIST1H1AQ02539 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms