Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDR2Q01850 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CDR2Q01850 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.21■□□□□ 0.67
CDR2Q01850 KRT18P57-201ENST00000443599 1254 ntBASIC19.21■□□□□ 0.67
CDR2Q01850 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CDR2Q01850 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.21■□□□□ 0.67
CDR2Q01850 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDR2Q01850 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.21■□□□□ 0.67
CDR2Q01850 LINC01023-201ENST00000606054 436 ntBASIC19.21■□□□□ 0.67
CDR2Q01850 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CDR2Q01850 AC020916.1-201ENST00000587762 1774 ntBASIC19.21■□□□□ 0.67
CDR2Q01850 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDR2Q01850 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.21■□□□□ 0.67
CDR2Q01850 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDR2Q01850 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDR2Q01850 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
CDR2Q01850 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDR2Q01850 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.21■□□□□ 0.67
CDR2Q01850 AC100803.2-201ENST00000562459 1963 ntBASIC19.21■□□□□ 0.67
CDR2Q01850 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.2■□□□□ 0.66
CDR2Q01850 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDR2Q01850 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDR2Q01850 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDR2Q01850 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDR2Q01850 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDR2Q01850 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDR2Q01850 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDR2Q01850 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDR2Q01850 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDR2Q01850 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDR2Q01850 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.2■□□□□ 0.66
CDR2Q01850 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CDR2Q01850 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDR2Q01850 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDR2Q01850 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CDR2Q01850 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDR2Q01850 AC022898.2-201ENST00000616822 1312 ntBASIC19.2■□□□□ 0.66
CDR2Q01850 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CDR2Q01850 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDR2Q01850 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDR2Q01850 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CDR2Q01850 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDR2Q01850 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.2■□□□□ 0.66
CDR2Q01850 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CDR2Q01850 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.19■□□□□ 0.66
CDR2Q01850 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CDR2Q01850 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDR2Q01850 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CDR2Q01850 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.19■□□□□ 0.66
CDR2Q01850 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.19■□□□□ 0.66
CDR2Q01850 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDR2Q01850 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDR2Q01850 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDR2Q01850 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDR2Q01850 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDR2Q01850 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.19■□□□□ 0.66
CDR2Q01850 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDR2Q01850 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.19■□□□□ 0.66
CDR2Q01850 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDR2Q01850 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CDR2Q01850 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDR2Q01850 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDR2Q01850 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.19■□□□□ 0.66
CDR2Q01850 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.19■□□□□ 0.66
CDR2Q01850 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.19■□□□□ 0.66
CDR2Q01850 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDR2Q01850 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDR2Q01850 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CDR2Q01850 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDR2Q01850 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDR2Q01850 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDR2Q01850 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDR2Q01850 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDR2Q01850 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CDR2Q01850 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CDR2Q01850 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDR2Q01850 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
CDR2Q01850 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.18■□□□□ 0.66
CDR2Q01850 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.18■□□□□ 0.66
CDR2Q01850 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDR2Q01850 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CDR2Q01850 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDR2Q01850 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
CDR2Q01850 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.18■□□□□ 0.66
CDR2Q01850 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDR2Q01850 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDR2Q01850 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDR2Q01850 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CDR2Q01850 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDR2Q01850 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CDR2Q01850 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CDR2Q01850 RNF152P1-201ENST00000397754 604 ntBASIC19.18■□□□□ 0.66
CDR2Q01850 TSPY5P-201ENST00000426936 936 ntBASIC19.18■□□□□ 0.66
CDR2Q01850 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.18■□□□□ 0.66
CDR2Q01850 AC092597.1-201ENST00000487352 616 ntBASIC19.18■□□□□ 0.66
CDR2Q01850 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.18■□□□□ 0.66
CDR2Q01850 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.18■□□□□ 0.66
CDR2Q01850 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CDR2Q01850 AC006011.2-201ENST00000621313 1158 ntBASIC19.18■□□□□ 0.66
CDR2Q01850 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms