Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRPXP78539 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.86□□□□□ -0.03
SRPXP78539 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRPXP78539 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.86□□□□□ -0.03
SRPXP78539 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRPXP78539 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.86□□□□□ -0.03
SRPXP78539 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
SRPXP78539 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRPXP78539 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRPXP78539 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SRPXP78539 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
SRPXP78539 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SRPXP78539 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.85□□□□□ -0.03
SRPXP78539 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SRPXP78539 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRPXP78539 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRPXP78539 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRPXP78539 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRPXP78539 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.85□□□□□ -0.03
SRPXP78539 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.85□□□□□ -0.03
SRPXP78539 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SRPXP78539 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRPXP78539 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRPXP78539 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.85□□□□□ -0.03
SRPXP78539 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SRPXP78539 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRPXP78539 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
SRPXP78539 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SRPXP78539 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRPXP78539 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
SRPXP78539 DUTP2-201ENST00000519164 463 ntBASIC14.85□□□□□ -0.03
SRPXP78539 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.85□□□□□ -0.03
SRPXP78539 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.85□□□□□ -0.03
SRPXP78539 MIR3180-5-201ENST00000583743 153 ntBASIC14.85□□□□□ -0.03
SRPXP78539 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC14.85□□□□□ -0.03
SRPXP78539 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.85□□□□□ -0.03
SRPXP78539 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SRPXP78539 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
SRPXP78539 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRPXP78539 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.85□□□□□ -0.03
SRPXP78539 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
SRPXP78539 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SRPXP78539 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRPXP78539 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SRPXP78539 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRPXP78539 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SRPXP78539 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SRPXP78539 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRPXP78539 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRPXP78539 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRPXP78539 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRPXP78539 KRT8P7-201ENST00000533003 1432 ntBASIC14.84□□□□□ -0.03
SRPXP78539 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.84□□□□□ -0.03
SRPXP78539 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.84□□□□□ -0.03
SRPXP78539 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.84□□□□□ -0.03
SRPXP78539 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRPXP78539 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SRPXP78539 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRPXP78539 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
SRPXP78539 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRPXP78539 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRPXP78539 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRPXP78539 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRPXP78539 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.84□□□□□ -0.03
SRPXP78539 AP003097.1-201ENST00000530657 1135 ntBASIC14.84□□□□□ -0.03
SRPXP78539 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRPXP78539 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.84□□□□□ -0.03
SRPXP78539 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.84□□□□□ -0.03
SRPXP78539 AC008622.2-201ENST00000617006 1229 ntBASIC14.84□□□□□ -0.03
SRPXP78539 AL023875.1-201ENST00000640777 796 ntBASIC14.84□□□□□ -0.03
SRPXP78539 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRPXP78539 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRPXP78539 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SRPXP78539 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRPXP78539 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.84□□□□□ -0.03
SRPXP78539 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SRPXP78539 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
SRPXP78539 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SRPXP78539 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.84□□□□□ -0.03
SRPXP78539 GPAT2P1-201ENST00000444924 1672 ntBASIC14.84□□□□□ -0.03
SRPXP78539 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SRPXP78539 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.03
SRPXP78539 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SRPXP78539 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.83□□□□□ -0.03
SRPXP78539 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SRPXP78539 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SRPXP78539 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SRPXP78539 AC011676.5-201ENST00000624864 2660 ntBASIC14.83□□□□□ -0.03
SRPXP78539 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SRPXP78539 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRPXP78539 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.83□□□□□ -0.04
SRPXP78539 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRPXP78539 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SRPXP78539 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SRPXP78539 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.83□□□□□ -0.04
SRPXP78539 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.83□□□□□ -0.04
SRPXP78539 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.83□□□□□ -0.04
SRPXP78539 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.83□□□□□ -0.04
SRPXP78539 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.83□□□□□ -0.04
SRPXP78539 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms