Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CX3CL1P78423 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CX3CL1P78423 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CX3CL1P78423 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CX3CL1P78423 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
CX3CL1P78423 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CX3CL1P78423 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.52□□□□□ -0.08
CX3CL1P78423 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CX3CL1P78423 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CX3CL1P78423 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.52□□□□□ -0.08
CX3CL1P78423 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.52□□□□□ -0.08
CX3CL1P78423 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CX3CL1P78423 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CX3CL1P78423 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CX3CL1P78423 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CX3CL1P78423 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
CX3CL1P78423 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CX3CL1P78423 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CX3CL1P78423 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CX3CL1P78423 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CX3CL1P78423 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CX3CL1P78423 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CX3CL1P78423 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CX3CL1P78423 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.52□□□□□ -0.09
CX3CL1P78423 RASA4DP-201ENST00000460726 1199 ntBASIC14.52□□□□□ -0.09
CX3CL1P78423 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.52□□□□□ -0.09
CX3CL1P78423 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CX3CL1P78423 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.52□□□□□ -0.09
CX3CL1P78423 RN7SL850P-201ENST00000579959 291 ntBASIC14.52□□□□□ -0.09
CX3CL1P78423 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CX3CL1P78423 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CX3CL1P78423 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.52□□□□□ -0.09
CX3CL1P78423 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CX3CL1P78423 AC099398.1-201ENST00000567919 2776 ntBASIC14.52□□□□□ -0.09
CX3CL1P78423 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.52□□□□□ -0.09
CX3CL1P78423 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CX3CL1P78423 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CX3CL1P78423 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CX3CL1P78423 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CX3CL1P78423 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CX3CL1P78423 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CX3CL1P78423 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CX3CL1P78423 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CX3CL1P78423 AC009053.2-201ENST00000563701 2365 ntBASIC14.52□□□□□ -0.09
CX3CL1P78423 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CX3CL1P78423 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.51□□□□□ -0.09
CX3CL1P78423 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.51□□□□□ -0.09
CX3CL1P78423 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CX3CL1P78423 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.51□□□□□ -0.09
CX3CL1P78423 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.51□□□□□ -0.09
CX3CL1P78423 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.51□□□□□ -0.09
CX3CL1P78423 AC093677.2-201ENST00000600169 1863 ntBASIC14.51□□□□□ -0.09
CX3CL1P78423 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CX3CL1P78423 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.51□□□□□ -0.09
CX3CL1P78423 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CX3CL1P78423 TMPOP1-202ENST00000424642 1267 ntBASIC14.51□□□□□ -0.09
CX3CL1P78423 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CX3CL1P78423 PVRIG2P-201ENST00000435460 978 ntBASIC14.51□□□□□ -0.09
CX3CL1P78423 AC104076.2-201ENST00000448912 469 ntBASIC14.51□□□□□ -0.09
CX3CL1P78423 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.51□□□□□ -0.09
CX3CL1P78423 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.51□□□□□ -0.09
CX3CL1P78423 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.51□□□□□ -0.09
CX3CL1P78423 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
CX3CL1P78423 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CX3CL1P78423 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.51□□□□□ -0.09
CX3CL1P78423 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.51□□□□□ -0.09
CX3CL1P78423 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 AC008764.6-201ENST00000595909 2069 ntBASIC14.51□□□□□ -0.09
CX3CL1P78423 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CX3CL1P78423 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.51□□□□□ -0.09
CX3CL1P78423 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CL1P78423 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.51□□□□□ -0.09
CX3CL1P78423 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CX3CL1P78423 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms