Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
YBX1P67809 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.55■□□□□ 0.4
YBX1P67809 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
YBX1P67809 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.55■□□□□ 0.4
YBX1P67809 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
YBX1P67809 AC024563.2-201ENST00000603282 481 ntBASIC17.55■□□□□ 0.4
YBX1P67809 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
YBX1P67809 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
YBX1P67809 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
YBX1P67809 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.55■□□□□ 0.4
YBX1P67809 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.55■□□□□ 0.4
YBX1P67809 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
YBX1P67809 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.55■□□□□ 0.4
YBX1P67809 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.55■□□□□ 0.4
YBX1P67809 AC012317.2-201ENST00000623305 2251 ntBASIC17.55■□□□□ 0.4
YBX1P67809 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
YBX1P67809 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
YBX1P67809 AL096828.2-201ENST00000567259 1965 ntBASIC17.55■□□□□ 0.4
YBX1P67809 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
YBX1P67809 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
YBX1P67809 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.55■□□□□ 0.4
YBX1P67809 AC108860.2-201ENST00000562760 2183 ntBASIC17.55■□□□□ 0.4
YBX1P67809 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
YBX1P67809 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
YBX1P67809 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YBX1P67809 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YBX1P67809 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.54■□□□□ 0.4
YBX1P67809 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.54■□□□□ 0.4
YBX1P67809 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.54■□□□□ 0.4
YBX1P67809 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YBX1P67809 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
YBX1P67809 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
YBX1P67809 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YBX1P67809 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YBX1P67809 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.54■□□□□ 0.4
YBX1P67809 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YBX1P67809 PCED1CP-201ENST00000419887 785 ntBASIC17.54■□□□□ 0.4
YBX1P67809 AL645929.1-201ENST00000420084 975 ntBASIC17.54■□□□□ 0.4
YBX1P67809 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.54■□□□□ 0.4
YBX1P67809 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
YBX1P67809 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YBX1P67809 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.54■□□□□ 0.4
YBX1P67809 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YBX1P67809 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.54■□□□□ 0.4
YBX1P67809 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
YBX1P67809 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.54■□□□□ 0.4
YBX1P67809 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
YBX1P67809 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YBX1P67809 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
YBX1P67809 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
YBX1P67809 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.54■□□□□ 0.4
YBX1P67809 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
YBX1P67809 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
YBX1P67809 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YBX1P67809 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YBX1P67809 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.54■□□□□ 0.4
YBX1P67809 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
YBX1P67809 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
YBX1P67809 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
YBX1P67809 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YBX1P67809 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
YBX1P67809 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YBX1P67809 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YBX1P67809 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.53■□□□□ 0.4
YBX1P67809 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YBX1P67809 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.53■□□□□ 0.4
YBX1P67809 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.53■□□□□ 0.4
YBX1P67809 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.53■□□□□ 0.4
YBX1P67809 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.53■□□□□ 0.4
YBX1P67809 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
YBX1P67809 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YBX1P67809 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YBX1P67809 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YBX1P67809 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
YBX1P67809 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
YBX1P67809 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YBX1P67809 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YBX1P67809 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.53■□□□□ 0.4
YBX1P67809 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YBX1P67809 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.53■□□□□ 0.4
YBX1P67809 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YBX1P67809 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.53■□□□□ 0.4
YBX1P67809 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
YBX1P67809 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YBX1P67809 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YBX1P67809 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.53■□□□□ 0.4
YBX1P67809 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YBX1P67809 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YBX1P67809 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YBX1P67809 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YBX1P67809 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
YBX1P67809 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
YBX1P67809 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.52■□□□□ 0.4
YBX1P67809 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YBX1P67809 AC132938.6-201ENST00000623828 1655 ntBASIC17.52■□□□□ 0.4
YBX1P67809 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YBX1P67809 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
YBX1P67809 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.52■□□□□ 0.4
YBX1P67809 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.52■□□□□ 0.4
YBX1P67809 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms