Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN17P56750 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN17P56750 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CLDN17P56750 SPDYE13P-201ENST00000445314 798 ntBASIC16.09■□□□□ 0.17
CLDN17P56750 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN17P56750 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN17P56750 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN17P56750 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.09■□□□□ 0.17
CLDN17P56750 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN17P56750 AC004263.2-201ENST00000617183 678 ntBASIC16.09■□□□□ 0.17
CLDN17P56750 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN17P56750 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN17P56750 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLDN17P56750 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CLDN17P56750 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN17P56750 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN17P56750 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CLDN17P56750 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN17P56750 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN17P56750 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN17P56750 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
CLDN17P56750 LINC00167-201ENST00000530583 1419 ntBASIC16.09■□□□□ 0.17
CLDN17P56750 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN17P56750 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CLDN17P56750 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLDN17P56750 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN17P56750 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.08■□□□□ 0.17
CLDN17P56750 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN17P56750 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.08■□□□□ 0.17
CLDN17P56750 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CLDN17P56750 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.08■□□□□ 0.17
CLDN17P56750 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN17P56750 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN17P56750 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CLDN17P56750 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN17P56750 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDN17P56750 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN17P56750 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDN17P56750 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN17P56750 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CLDN17P56750 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDN17P56750 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN17P56750 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN17P56750 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN17P56750 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN17P56750 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN17P56750 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN17P56750 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN17P56750 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN17P56750 IGHGP-201ENST00000390555 1178 ntBASIC16.08■□□□□ 0.16
CLDN17P56750 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN17P56750 AL031133.1-201ENST00000406807 723 ntBASIC16.08■□□□□ 0.16
CLDN17P56750 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDN17P56750 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN17P56750 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN17P56750 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.08■□□□□ 0.16
CLDN17P56750 AC087388.1-201ENST00000571370 1112 ntBASIC16.08■□□□□ 0.16
CLDN17P56750 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN17P56750 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.08■□□□□ 0.16
CLDN17P56750 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.08■□□□□ 0.16
CLDN17P56750 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN17P56750 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.08■□□□□ 0.16
CLDN17P56750 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDN17P56750 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CLDN17P56750 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN17P56750 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN17P56750 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN17P56750 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN17P56750 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CLDN17P56750 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN17P56750 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN17P56750 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
CLDN17P56750 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CLDN17P56750 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN17P56750 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN17P56750 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
CLDN17P56750 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
CLDN17P56750 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN17P56750 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN17P56750 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN17P56750 AL645929.1-201ENST00000420084 975 ntBASIC16.07■□□□□ 0.16
CLDN17P56750 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN17P56750 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.07■□□□□ 0.16
CLDN17P56750 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.07■□□□□ 0.16
CLDN17P56750 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.07■□□□□ 0.16
CLDN17P56750 AC005332.3-201ENST00000589904 676 ntBASIC16.07■□□□□ 0.16
CLDN17P56750 GPR32P1-201ENST00000601788 811 ntBASIC16.07■□□□□ 0.16
CLDN17P56750 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN17P56750 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN17P56750 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN17P56750 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN17P56750 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.07■□□□□ 0.16
CLDN17P56750 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.07■□□□□ 0.16
CLDN17P56750 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN17P56750 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN17P56750 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.07■□□□□ 0.16
CLDN17P56750 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN17P56750 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
CLDN17P56750 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN17P56750 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms