Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDH15P55291 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH15P55291 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.82■□□□□ 0.28
CDH15P55291 MTDHP1-201ENST00000605323 784 ntBASIC16.82■□□□□ 0.28
CDH15P55291 AC006557.6-201ENST00000623071 864 ntBASIC16.82■□□□□ 0.28
CDH15P55291 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDH15P55291 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDH15P55291 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CDH15P55291 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CDH15P55291 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.82■□□□□ 0.28
CDH15P55291 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
CDH15P55291 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDH15P55291 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 FLJ38576-201ENST00000623820 2459 ntBASIC16.81■□□□□ 0.28
CDH15P55291 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH15P55291 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.81■□□□□ 0.28
CDH15P55291 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH15P55291 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH15P55291 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CDH15P55291 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDH15P55291 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH15P55291 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDH15P55291 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH15P55291 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDH15P55291 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH15P55291 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH15P55291 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH15P55291 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH15P55291 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.81■□□□□ 0.28
CDH15P55291 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 AC120498.8-201ENST00000614275 531 ntBASIC16.81■□□□□ 0.28
CDH15P55291 AL121906.2-201ENST00000621597 723 ntBASIC16.81■□□□□ 0.28
CDH15P55291 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 LINC00554-201ENST00000564841 3011 ntBASIC16.81■□□□□ 0.28
CDH15P55291 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.81■□□□□ 0.28
CDH15P55291 AGGF1P2-201ENST00000426656 2106 ntBASIC16.81■□□□□ 0.28
CDH15P55291 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH15P55291 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDH15P55291 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH15P55291 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CDH15P55291 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH15P55291 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.8■□□□□ 0.28
CDH15P55291 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CDH15P55291 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH15P55291 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH15P55291 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDH15P55291 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 SNORA78-201ENST00000459373 127 ntBASIC16.8■□□□□ 0.28
CDH15P55291 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH15P55291 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.8■□□□□ 0.28
CDH15P55291 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH15P55291 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CDH15P55291 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH15P55291 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.8■□□□□ 0.28
CDH15P55291 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms