Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.44■□□□□ 0.22
HMGA2P52926 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGA2P52926 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.44■□□□□ 0.22
HMGA2P52926 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.44■□□□□ 0.22
HMGA2P52926 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGA2P52926 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HMGA2P52926 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HMGA2P52926 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGA2P52926 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGA2P52926 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGA2P52926 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
HMGA2P52926 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HMGA2P52926 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGA2P52926 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HMGA2P52926 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.43■□□□□ 0.22
HMGA2P52926 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGA2P52926 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.43■□□□□ 0.22
HMGA2P52926 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.43■□□□□ 0.22
HMGA2P52926 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HMGA2P52926 AC010653.2-201ENST00000623505 997 ntBASIC16.43■□□□□ 0.22
HMGA2P52926 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HMGA2P52926 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGA2P52926 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.43■□□□□ 0.22
HMGA2P52926 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGA2P52926 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGA2P52926 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMGA2P52926 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGA2P52926 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGA2P52926 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
HMGA2P52926 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGA2P52926 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
HMGA2P52926 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGA2P52926 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.42■□□□□ 0.22
HMGA2P52926 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HMGA2P52926 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HMGA2P52926 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HMGA2P52926 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HMGA2P52926 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGA2P52926 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGA2P52926 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGA2P52926 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HMGA2P52926 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.42■□□□□ 0.22
HMGA2P52926 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.42■□□□□ 0.22
HMGA2P52926 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
HMGA2P52926 AC116562.4-202ENST00000641738 218 ntBASIC16.42■□□□□ 0.22
HMGA2P52926 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HMGA2P52926 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HMGA2P52926 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGA2P52926 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HMGA2P52926 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.42■□□□□ 0.22
HMGA2P52926 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGA2P52926 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HMGA2P52926 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.41■□□□□ 0.22
HMGA2P52926 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGA2P52926 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HMGA2P52926 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGA2P52926 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGA2P52926 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGA2P52926 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGA2P52926 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGA2P52926 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HMGA2P52926 UNC93B2-201ENST00000285383 730 ntBASIC16.41■□□□□ 0.22
HMGA2P52926 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGA2P52926 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGA2P52926 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGA2P52926 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGA2P52926 DDX43P3-201ENST00000441064 443 ntBASIC16.41■□□□□ 0.22
HMGA2P52926 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.41■□□□□ 0.22
HMGA2P52926 AP003071.4-201ENST00000562276 1284 ntBASIC16.41■□□□□ 0.22
HMGA2P52926 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGA2P52926 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGA2P52926 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGA2P52926 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGA2P52926 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGA2P52926 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGA2P52926 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGA2P52926 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGA2P52926 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
HMGA2P52926 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGA2P52926 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGA2P52926 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGA2P52926 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms