Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMSP52788 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.89■□□□□ 0.29
SMSP52788 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMSP52788 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
SMSP52788 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SMSP52788 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.89■□□□□ 0.29
SMSP52788 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMSP52788 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
SMSP52788 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SMSP52788 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMSP52788 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SMSP52788 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.89■□□□□ 0.29
SMSP52788 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SMSP52788 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMSP52788 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
SMSP52788 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.89■□□□□ 0.29
SMSP52788 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMSP52788 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.88■□□□□ 0.29
SMSP52788 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMSP52788 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.88■□□□□ 0.29
SMSP52788 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMSP52788 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.88■□□□□ 0.29
SMSP52788 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMSP52788 AC134043.2-201ENST00000624206 2238 ntBASIC16.88■□□□□ 0.29
SMSP52788 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SMSP52788 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMSP52788 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMSP52788 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMSP52788 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMSP52788 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMSP52788 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.88■□□□□ 0.29
SMSP52788 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SMSP52788 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.88■□□□□ 0.29
SMSP52788 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMSP52788 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
SMSP52788 MIR3652-201ENST00000579335 131 ntBASIC16.88■□□□□ 0.29
SMSP52788 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMSP52788 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.88■□□□□ 0.29
SMSP52788 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.88■□□□□ 0.29
SMSP52788 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.88■□□□□ 0.29
SMSP52788 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMSP52788 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SMSP52788 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.88■□□□□ 0.29
SMSP52788 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SMSP52788 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.88■□□□□ 0.29
SMSP52788 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMSP52788 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.88■□□□□ 0.29
SMSP52788 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMSP52788 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMSP52788 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.88■□□□□ 0.29
SMSP52788 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMSP52788 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
SMSP52788 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SMSP52788 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SMSP52788 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.87■□□□□ 0.29
SMSP52788 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SMSP52788 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.87■□□□□ 0.29
SMSP52788 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.87■□□□□ 0.29
SMSP52788 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SMSP52788 HYMAI.1-201ENST00000620949 238 ntBASIC16.87■□□□□ 0.29
SMSP52788 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
SMSP52788 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SMSP52788 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.87■□□□□ 0.29
SMSP52788 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
SMSP52788 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.87■□□□□ 0.29
SMSP52788 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SMSP52788 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SMSP52788 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SMSP52788 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.87■□□□□ 0.29
SMSP52788 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMSP52788 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMSP52788 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms