Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRIM2P49643 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.15■□□□□ 0.34
PRIM2P49643 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRIM2P49643 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRIM2P49643 SDHAP2-201ENST00000455183 2001 ntBASIC17.15■□□□□ 0.34
PRIM2P49643 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
PRIM2P49643 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRIM2P49643 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRIM2P49643 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.15■□□□□ 0.34
PRIM2P49643 ECEL1P2-202ENST00000465689 757 ntBASIC17.15■□□□□ 0.34
PRIM2P49643 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRIM2P49643 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRIM2P49643 AC104390.1-201ENST00000555663 520 ntBASIC17.15■□□□□ 0.34
PRIM2P49643 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.15■□□□□ 0.34
PRIM2P49643 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PRIM2P49643 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PRIM2P49643 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRIM2P49643 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRIM2P49643 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRIM2P49643 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRIM2P49643 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRIM2P49643 KRT18P22-201ENST00000402024 1347 ntBASIC17.15■□□□□ 0.34
PRIM2P49643 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRIM2P49643 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PRIM2P49643 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
PRIM2P49643 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRIM2P49643 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRIM2P49643 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PRIM2P49643 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRIM2P49643 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PRIM2P49643 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRIM2P49643 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
PRIM2P49643 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PRIM2P49643 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
PRIM2P49643 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
PRIM2P49643 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.14■□□□□ 0.33
PRIM2P49643 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRIM2P49643 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.14■□□□□ 0.33
PRIM2P49643 LINC00896-202ENST00000609602 2128 ntBASIC17.14■□□□□ 0.33
PRIM2P49643 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.14■□□□□ 0.33
PRIM2P49643 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRIM2P49643 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRIM2P49643 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.14■□□□□ 0.33
PRIM2P49643 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRIM2P49643 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRIM2P49643 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.14■□□□□ 0.33
PRIM2P49643 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.14■□□□□ 0.33
PRIM2P49643 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRIM2P49643 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.14■□□□□ 0.33
PRIM2P49643 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.14■□□□□ 0.33
PRIM2P49643 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.14■□□□□ 0.33
PRIM2P49643 FAM87A-204ENST00000613235 858 ntBASIC17.14■□□□□ 0.33
PRIM2P49643 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PRIM2P49643 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRIM2P49643 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.14■□□□□ 0.33
PRIM2P49643 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRIM2P49643 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRIM2P49643 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.14■□□□□ 0.33
PRIM2P49643 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PRIM2P49643 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
PRIM2P49643 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.14■□□□□ 0.33
PRIM2P49643 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRIM2P49643 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PRIM2P49643 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRIM2P49643 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRIM2P49643 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRIM2P49643 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.14■□□□□ 0.33
PRIM2P49643 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PRIM2P49643 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.13■□□□□ 0.33
PRIM2P49643 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRIM2P49643 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRIM2P49643 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRIM2P49643 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.13■□□□□ 0.33
PRIM2P49643 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PRIM2P49643 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRIM2P49643 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRIM2P49643 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRIM2P49643 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.13■□□□□ 0.33
PRIM2P49643 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRIM2P49643 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRIM2P49643 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRIM2P49643 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRIM2P49643 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PRIM2P49643 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRIM2P49643 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRIM2P49643 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.13■□□□□ 0.33
PRIM2P49643 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PRIM2P49643 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.13■□□□□ 0.33
PRIM2P49643 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.13■□□□□ 0.33
PRIM2P49643 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRIM2P49643 AP000523.1-201ENST00000398242 1049 ntBASIC17.13■□□□□ 0.33
PRIM2P49643 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRIM2P49643 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRIM2P49643 AC087499.1-201ENST00000418141 1075 ntBASIC17.13■□□□□ 0.33
PRIM2P49643 AC009947.2-201ENST00000444014 672 ntBASIC17.13■□□□□ 0.33
PRIM2P49643 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.13■□□□□ 0.33
PRIM2P49643 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.13■□□□□ 0.33
PRIM2P49643 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.13■□□□□ 0.33
PRIM2P49643 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRIM2P49643 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms