Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SLC1A1P43005 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC1A1P43005 LINC00602-201ENST00000629776 2065 ntBASIC18.86■□□□□ 0.61
SLC1A1P43005 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC1A1P43005 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC1A1P43005 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC1A1P43005 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SLC1A1P43005 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
SLC1A1P43005 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SLC1A1P43005 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SLC1A1P43005 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC1A1P43005 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC1A1P43005 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
SLC1A1P43005 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
SLC1A1P43005 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SLC1A1P43005 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC1A1P43005 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC1A1P43005 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC1A1P43005 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.85■□□□□ 0.61
SLC1A1P43005 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC1A1P43005 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.85■□□□□ 0.61
SLC1A1P43005 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.85■□□□□ 0.61
SLC1A1P43005 GCSHP2-201ENST00000560971 527 ntBASIC18.85■□□□□ 0.61
SLC1A1P43005 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC1A1P43005 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC1A1P43005 AC145285.6-201ENST00000604632 637 ntBASIC18.85■□□□□ 0.61
SLC1A1P43005 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
SLC1A1P43005 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC1A1P43005 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC1A1P43005 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 AC133963.1-201ENST00000504166 1679 ntBASIC18.85■□□□□ 0.61
SLC1A1P43005 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 AL355312.1-201ENST00000407115 2176 ntBASIC18.85■□□□□ 0.61
SLC1A1P43005 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC1A1P43005 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC1A1P43005 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
SLC1A1P43005 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC1A1P43005 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A1P43005 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A1P43005 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC1A1P43005 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC1A1P43005 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A1P43005 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC1A1P43005 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A1P43005 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A1P43005 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A1P43005 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC1A1P43005 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC1A1P43005 AL596275.1-201ENST00000423464 877 ntBASIC18.84■□□□□ 0.61
SLC1A1P43005 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC1A1P43005 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC1A1P43005 AC024563.2-201ENST00000603282 481 ntBASIC18.84■□□□□ 0.61
SLC1A1P43005 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SLC1A1P43005 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A1P43005 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A1P43005 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A1P43005 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A1P43005 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A1P43005 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
SLC1A1P43005 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A1P43005 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC1A1P43005 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC1A1P43005 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC1A1P43005 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SLC1A1P43005 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC1A1P43005 OR6D1P-202ENST00000641007 5290 ntBASIC18.83■□□□□ 0.61
SLC1A1P43005 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC1A1P43005 AL645608.8-201ENST00000606034 2086 ntBASIC18.83■□□□□ 0.61
SLC1A1P43005 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.83■□□□□ 0.61
SLC1A1P43005 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC1A1P43005 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC1A1P43005 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SLC1A1P43005 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
SLC1A1P43005 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC1A1P43005 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC1A1P43005 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.83■□□□□ 0.61
SLC1A1P43005 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC1A1P43005 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC1A1P43005 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SLC1A1P43005 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC1A1P43005 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms