Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HTTP42858 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HTTP42858 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.11■□□□□ 0.81
HTTP42858 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.11■□□□□ 0.81
HTTP42858 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HTTP42858 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.1■□□□□ 0.81
HTTP42858 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HTTP42858 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.1■□□□□ 0.81
HTTP42858 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTTP42858 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.1■□□□□ 0.81
HTTP42858 DUX4L27-201ENST00000554796 1261 ntBASIC20.1■□□□□ 0.81
HTTP42858 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.1■□□□□ 0.81
HTTP42858 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.1■□□□□ 0.81
HTTP42858 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.1■□□□□ 0.81
HTTP42858 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTTP42858 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
HTTP42858 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.1■□□□□ 0.81
HTTP42858 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.1■□□□□ 0.81
HTTP42858 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.1■□□□□ 0.81
HTTP42858 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.1■□□□□ 0.81
HTTP42858 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTTP42858 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HTTP42858 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.1■□□□□ 0.81
HTTP42858 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.1■□□□□ 0.81
HTTP42858 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
HTTP42858 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTTP42858 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.1■□□□□ 0.81
HTTP42858 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTTP42858 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HTTP42858 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTTP42858 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HTTP42858 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HTTP42858 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.1■□□□□ 0.81
HTTP42858 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.1■□□□□ 0.81
HTTP42858 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HTTP42858 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HTTP42858 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HTTP42858 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HTTP42858 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
HTTP42858 RNA5SP421-201ENST00000516864 134 ntBASIC20.09■□□□□ 0.81
HTTP42858 AL008721.1-201ENST00000609964 604 ntBASIC20.09■□□□□ 0.81
HTTP42858 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HTTP42858 BCAR1-209ENST00000546196 1340 ntBASIC20.09■□□□□ 0.81
HTTP42858 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HTTP42858 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTTP42858 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTTP42858 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTTP42858 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HTTP42858 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HTTP42858 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.09■□□□□ 0.81
HTTP42858 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.09■□□□□ 0.81
HTTP42858 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTTP42858 AC092919.2-201ENST00000623631 1645 ntBASIC20.09■□□□□ 0.81
HTTP42858 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.09■□□□□ 0.81
HTTP42858 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.09■□□□□ 0.81
HTTP42858 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.09■□□□□ 0.81
HTTP42858 AC008761.3-201ENST00000624803 892 ntBASIC20.09■□□□□ 0.81
HTTP42858 KRT8P47-201ENST00000604727 1398 ntBASIC20.09■□□□□ 0.81
HTTP42858 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HTTP42858 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.09■□□□□ 0.81
HTTP42858 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HTTP42858 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.08■□□□□ 0.81
HTTP42858 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.08■□□□□ 0.81
HTTP42858 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.08■□□□□ 0.81
HTTP42858 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
HTTP42858 NCF1C-201ENST00000438382 1427 ntBASIC20.08■□□□□ 0.81
HTTP42858 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HTTP42858 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
HTTP42858 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
HTTP42858 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
HTTP42858 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HTTP42858 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HTTP42858 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HTTP42858 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
HTTP42858 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HTTP42858 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.08■□□□□ 0.8
HTTP42858 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HTTP42858 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
HTTP42858 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.07■□□□□ 0.8
HTTP42858 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HTTP42858 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HTTP42858 PMS2P4-201ENST00000412466 1052 ntBASIC20.07■□□□□ 0.8
HTTP42858 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.07■□□□□ 0.8
HTTP42858 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.07■□□□□ 0.8
HTTP42858 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.07■□□□□ 0.8
HTTP42858 AC004835.2-201ENST00000603762 682 ntBASIC20.07■□□□□ 0.8
HTTP42858 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HTTP42858 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HTTP42858 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
HTTP42858 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HTTP42858 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.07■□□□□ 0.8
HTTP42858 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HTTP42858 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HTTP42858 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HTTP42858 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HTTP42858 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
HTTP42858 AP002414.1-201ENST00000391405 1147 ntBASIC20.07■□□□□ 0.8
HTTP42858 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
HTTP42858 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HTTP42858 AL049757.1-201ENST00000616842 1596 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms