Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CEACAM3P40198 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CEACAM3P40198 AC135776.1-201ENST00000319817 2481 ntBASIC14.7□□□□□ -0.06
CEACAM3P40198 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CEACAM3P40198 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.7□□□□□ -0.06
CEACAM3P40198 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CEACAM3P40198 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CEACAM3P40198 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CEACAM3P40198 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CEACAM3P40198 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.69□□□□□ -0.06
CEACAM3P40198 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CEACAM3P40198 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.69□□□□□ -0.06
CEACAM3P40198 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CEACAM3P40198 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CEACAM3P40198 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CEACAM3P40198 AC011270.2-201ENST00000624293 2550 ntBASIC14.69□□□□□ -0.06
CEACAM3P40198 ABALON-201ENST00000629058 1903 ntBASIC14.69□□□□□ -0.06
CEACAM3P40198 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CEACAM3P40198 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CEACAM3P40198 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CEACAM3P40198 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.69□□□□□ -0.06
CEACAM3P40198 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.69□□□□□ -0.06
CEACAM3P40198 AC091076.1-201ENST00000610741 619 ntBASIC14.69□□□□□ -0.06
CEACAM3P40198 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.69□□□□□ -0.06
CEACAM3P40198 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.69□□□□□ -0.06
CEACAM3P40198 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CEACAM3P40198 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CEACAM3P40198 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CEACAM3P40198 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CEACAM3P40198 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.69□□□□□ -0.06
CEACAM3P40198 AC093010.1-201ENST00000473625 1624 ntBASIC14.69□□□□□ -0.06
CEACAM3P40198 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CEACAM3P40198 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CEACAM3P40198 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.69□□□□□ -0.06
CEACAM3P40198 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CEACAM3P40198 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CEACAM3P40198 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.69□□□□□ -0.06
CEACAM3P40198 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CEACAM3P40198 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CEACAM3P40198 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.69□□□□□ -0.06
CEACAM3P40198 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CEACAM3P40198 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.68□□□□□ -0.06
CEACAM3P40198 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.68□□□□□ -0.06
CEACAM3P40198 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CEACAM3P40198 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.68□□□□□ -0.06
CEACAM3P40198 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.68□□□□□ -0.06
CEACAM3P40198 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CEACAM3P40198 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.68□□□□□ -0.06
CEACAM3P40198 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CEACAM3P40198 TSPY12P-201ENST00000421279 868 ntBASIC14.68□□□□□ -0.06
CEACAM3P40198 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.68□□□□□ -0.06
CEACAM3P40198 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.68□□□□□ -0.06
CEACAM3P40198 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.68□□□□□ -0.06
CEACAM3P40198 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.68□□□□□ -0.06
CEACAM3P40198 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.68□□□□□ -0.06
CEACAM3P40198 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CEACAM3P40198 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CEACAM3P40198 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CEACAM3P40198 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 AL353692.3-201ENST00000407031 1396 ntBASIC14.68□□□□□ -0.06
CEACAM3P40198 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.68□□□□□ -0.06
CEACAM3P40198 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CEACAM3P40198 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CEACAM3P40198 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.68□□□□□ -0.06
CEACAM3P40198 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CEACAM3P40198 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.67□□□□□ -0.06
CEACAM3P40198 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.67□□□□□ -0.06
CEACAM3P40198 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CEACAM3P40198 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CEACAM3P40198 BICD1-207ENST00000551848 1962 ntBASIC14.67□□□□□ -0.06
CEACAM3P40198 AL096828.2-201ENST00000567259 1965 ntBASIC14.67□□□□□ -0.06
CEACAM3P40198 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
CEACAM3P40198 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CEACAM3P40198 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms