Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KCNA3P22001 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KCNA3P22001 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KCNA3P22001 AC025580.3-201ENST00000617932 1424 ntBASIC21.94■■□□□ 1.1
KCNA3P22001 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
KCNA3P22001 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
KCNA3P22001 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
KCNA3P22001 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KCNA3P22001 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
KCNA3P22001 AC132938.5-201ENST00000624980 1813 ntBASIC21.94■■□□□ 1.1
KCNA3P22001 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
KCNA3P22001 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KCNA3P22001 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
KCNA3P22001 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
KCNA3P22001 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
KCNA3P22001 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KCNA3P22001 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KCNA3P22001 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
KCNA3P22001 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KCNA3P22001 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KCNA3P22001 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KCNA3P22001 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KCNA3P22001 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.93■■□□□ 1.1
KCNA3P22001 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KCNA3P22001 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.93■■□□□ 1.1
KCNA3P22001 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.93■■□□□ 1.1
KCNA3P22001 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.93■■□□□ 1.1
KCNA3P22001 AC103564.2-201ENST00000432853 1299 ntBASIC21.93■■□□□ 1.1
KCNA3P22001 NCF1C-201ENST00000438382 1427 ntBASIC21.93■■□□□ 1.1
KCNA3P22001 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.93■■□□□ 1.1
KCNA3P22001 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KCNA3P22001 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.93■■□□□ 1.1
KCNA3P22001 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.93■■□□□ 1.1
KCNA3P22001 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
KCNA3P22001 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
KCNA3P22001 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.93■■□□□ 1.1
KCNA3P22001 AL353593.2-201ENST00000602529 1483 ntBASIC21.93■■□□□ 1.1
KCNA3P22001 Z92544.3-201ENST00000624747 417 ntBASIC21.93■■□□□ 1.1
KCNA3P22001 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
KCNA3P22001 AL049812.1-201ENST00000432563 2267 ntBASIC21.92■■□□□ 1.1
KCNA3P22001 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
KCNA3P22001 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNA3P22001 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNA3P22001 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNA3P22001 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KCNA3P22001 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
KCNA3P22001 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KCNA3P22001 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.92■■□□□ 1.1
KCNA3P22001 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.92■■□□□ 1.1
KCNA3P22001 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.92■■□□□ 1.1
KCNA3P22001 AC015922.1-201ENST00000421102 1152 ntBASIC21.92■■□□□ 1.1
KCNA3P22001 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
KCNA3P22001 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.92■■□□□ 1.1
KCNA3P22001 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.92■■□□□ 1.1
KCNA3P22001 AC190387.1-201ENST00000551683 408 ntBASIC21.92■■□□□ 1.1
KCNA3P22001 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
KCNA3P22001 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNA3P22001 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KCNA3P22001 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KCNA3P22001 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNA3P22001 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNA3P22001 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
KCNA3P22001 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNA3P22001 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.92■■□□□ 1.1
KCNA3P22001 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
KCNA3P22001 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KCNA3P22001 AL161938.1-201ENST00000569833 2180 ntBASIC21.91■■□□□ 1.1
KCNA3P22001 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.91■■□□□ 1.1
KCNA3P22001 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
KCNA3P22001 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
KCNA3P22001 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.91■■□□□ 1.1
KCNA3P22001 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KCNA3P22001 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
KCNA3P22001 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.91■■□□□ 1.1
KCNA3P22001 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.91■■□□□ 1.1
KCNA3P22001 AC093520.2-201ENST00000561830 333 ntBASIC21.91■■□□□ 1.1
KCNA3P22001 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.91■■□□□ 1.1
KCNA3P22001 AL035252.4-201ENST00000624174 288 ntBASIC21.91■■□□□ 1.1
KCNA3P22001 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
KCNA3P22001 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
KCNA3P22001 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.9■■□□□ 1.1
KCNA3P22001 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KCNA3P22001 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.9■■□□□ 1.1
KCNA3P22001 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KCNA3P22001 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KCNA3P22001 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KCNA3P22001 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KCNA3P22001 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KCNA3P22001 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
KCNA3P22001 COX5BP2-201ENST00000392354 334 ntBASIC21.9■■□□□ 1.1
KCNA3P22001 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.9■■□□□ 1.1
KCNA3P22001 AC025678.2-201ENST00000562061 970 ntBASIC21.9■■□□□ 1.1
KCNA3P22001 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KCNA3P22001 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.9■■□□□ 1.1
KCNA3P22001 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KCNA3P22001 AL049757.1-201ENST00000616842 1596 ntBASIC21.9■■□□□ 1.1
KCNA3P22001 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.9■■□□□ 1.1
KCNA3P22001 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KCNA3P22001 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
KCNA3P22001 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms