Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 SPDYE13P-201ENST00000445314 798 ntBASIC18.19■□□□□ 0.5
HLA-DPA1P20036 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 AC004263.2-201ENST00000617183 678 ntBASIC18.19■□□□□ 0.5
HLA-DPA1P20036 AL590326.2-201ENST00000625139 305 ntBASIC18.19■□□□□ 0.5
HLA-DPA1P20036 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DPA1P20036 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 GPR32P1-201ENST00000601788 811 ntBASIC18.18■□□□□ 0.5
HLA-DPA1P20036 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
HLA-DPA1P20036 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
HLA-DPA1P20036 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
HLA-DPA1P20036 AC018470.1-201ENST00000624790 3129 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms