Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 IER3-202ENST00000376377 1350 ntBASIC19.34■□□□□ 0.69
CD58P19256 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CD58P19256 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD58P19256 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD58P19256 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD58P19256 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.34■□□□□ 0.69
CD58P19256 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.34■□□□□ 0.69
CD58P19256 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD58P19256 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.34■□□□□ 0.69
CD58P19256 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD58P19256 TSPY22P-201ENST00000427496 604 ntBASIC19.34■□□□□ 0.69
CD58P19256 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD58P19256 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.34■□□□□ 0.69
CD58P19256 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.34■□□□□ 0.69
CD58P19256 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.34■□□□□ 0.69
CD58P19256 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.34■□□□□ 0.69
CD58P19256 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CD58P19256 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.34■□□□□ 0.69
CD58P19256 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD58P19256 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD58P19256 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD58P19256 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD58P19256 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD58P19256 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CD58P19256 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD58P19256 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD58P19256 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.33■□□□□ 0.69
CD58P19256 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.33■□□□□ 0.69
CD58P19256 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.33■□□□□ 0.69
CD58P19256 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.33■□□□□ 0.69
CD58P19256 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD58P19256 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD58P19256 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CD58P19256 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.33■□□□□ 0.69
CD58P19256 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD58P19256 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD58P19256 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.33■□□□□ 0.68
CD58P19256 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.33■□□□□ 0.68
CD58P19256 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.33■□□□□ 0.68
CD58P19256 AC116407.4-201ENST00000623319 1061 ntBASIC19.33■□□□□ 0.68
CD58P19256 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CD58P19256 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD58P19256 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CD58P19256 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.33■□□□□ 0.68
CD58P19256 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CD58P19256 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
CD58P19256 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
CD58P19256 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD58P19256 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CD58P19256 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD58P19256 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CD58P19256 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
CD58P19256 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD58P19256 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD58P19256 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CD58P19256 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD58P19256 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CD58P19256 AC138028.4-201ENST00000564984 1845 ntBASIC19.32■□□□□ 0.68
CD58P19256 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.32■□□□□ 0.68
CD58P19256 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.32■□□□□ 0.68
CD58P19256 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.32■□□□□ 0.68
CD58P19256 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD58P19256 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD58P19256 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD58P19256 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CD58P19256 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD58P19256 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CD58P19256 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD58P19256 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.32■□□□□ 0.68
CD58P19256 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.32■□□□□ 0.68
CD58P19256 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
CD58P19256 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.32■□□□□ 0.68
CD58P19256 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.32■□□□□ 0.68
CD58P19256 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.32■□□□□ 0.68
CD58P19256 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.32■□□□□ 0.68
CD58P19256 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CD58P19256 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.32■□□□□ 0.68
CD58P19256 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD58P19256 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.32■□□□□ 0.68
CD58P19256 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD58P19256 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.32■□□□□ 0.68
CD58P19256 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD58P19256 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD58P19256 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD58P19256 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD58P19256 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD58P19256 AC068880.1-201ENST00000507289 2297 ntBASIC19.31■□□□□ 0.68
CD58P19256 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.31■□□□□ 0.68
CD58P19256 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD58P19256 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.31■□□□□ 0.68
CD58P19256 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.31■□□□□ 0.68
CD58P19256 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD58P19256 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.31■□□□□ 0.68
CD58P19256 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.31■□□□□ 0.68
CD58P19256 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.31■□□□□ 0.68
CD58P19256 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD58P19256 TSPY12P-201ENST00000421279 868 ntBASIC19.31■□□□□ 0.68
CD58P19256 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD58P19256 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD58P19256 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms