Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CFTRP13569 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC30.6■■■□□ 2.49
CFTRP13569 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CFTRP13569 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC30.6■■■□□ 2.49
CFTRP13569 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CFTRP13569 CD99-202ENST00000381180 530 ntTSL 2 BASIC30.6■■■□□ 2.49
CFTRP13569 NKTR-203ENST00000442970 646 ntTSL 2 BASIC30.6■■■□□ 2.49
CFTRP13569 AC074386.1-202ENST00000463561 864 ntBASIC30.6■■■□□ 2.49
CFTRP13569 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC30.6■■■□□ 2.49
CFTRP13569 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.49
CFTRP13569 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC30.6■■■□□ 2.49
CFTRP13569 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC30.6■■■□□ 2.49
CFTRP13569 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC30.59■■■□□ 2.49
CFTRP13569 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
CFTRP13569 AC244107.1-201ENST00000442033 332 ntBASIC30.59■■■□□ 2.49
CFTRP13569 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC30.59■■■□□ 2.49
CFTRP13569 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC30.59■■■□□ 2.49
CFTRP13569 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CFTRP13569 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC30.59■■■□□ 2.49
CFTRP13569 INO80C-206ENST00000586489 594 ntTSL 3 BASIC30.59■■■□□ 2.49
CFTRP13569 AC025580.3-201ENST00000617932 1424 ntBASIC30.59■■■□□ 2.49
CFTRP13569 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CFTRP13569 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CFTRP13569 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC30.59■■■□□ 2.49
CFTRP13569 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
CFTRP13569 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
CFTRP13569 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC30.58■■■□□ 2.49
CFTRP13569 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC30.58■■■□□ 2.49
CFTRP13569 AC138761.1-201ENST00000584393 385 ntBASIC30.58■■■□□ 2.49
CFTRP13569 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC30.58■■■□□ 2.49
CFTRP13569 AC068137.2-201ENST00000605408 478 ntBASIC30.58■■■□□ 2.49
CFTRP13569 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CFTRP13569 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
CFTRP13569 GMCL1P1-201ENST00000463439 1581 ntBASIC30.58■■■□□ 2.49
CFTRP13569 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CFTRP13569 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC30.58■■■□□ 2.49
CFTRP13569 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC30.58■■■□□ 2.49
CFTRP13569 AL121761.2-201ENST00000598007 1648 ntBASIC30.57■■■□□ 2.49
CFTRP13569 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC30.57■■■□□ 2.48
CFTRP13569 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC30.57■■■□□ 2.48
CFTRP13569 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC30.57■■■□□ 2.48
CFTRP13569 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.48
CFTRP13569 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC30.57■■■□□ 2.48
CFTRP13569 AL353135.1-201ENST00000606729 504 ntBASIC30.57■■■□□ 2.48
CFTRP13569 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CFTRP13569 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CFTRP13569 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CFTRP13569 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC30.57■■■□□ 2.48
CFTRP13569 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC30.57■■■□□ 2.48
CFTRP13569 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CFTRP13569 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CFTRP13569 AC007952.6-201ENST00000573168 2673 ntBASIC30.57■■■□□ 2.48
CFTRP13569 AC003957.1-201ENST00000625108 2673 ntBASIC30.57■■■□□ 2.48
CFTRP13569 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CFTRP13569 COPE-202ENST00000349893 948 ntTSL 2 BASIC30.57■■■□□ 2.48
CFTRP13569 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CFTRP13569 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CFTRP13569 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC30.57■■■□□ 2.48
CFTRP13569 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC30.57■■■□□ 2.48
CFTRP13569 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CFTRP13569 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CFTRP13569 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC30.57■■■□□ 2.48
CFTRP13569 Z92544.3-201ENST00000624747 417 ntBASIC30.57■■■□□ 2.48
CFTRP13569 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC30.57■■■□□ 2.48
CFTRP13569 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CFTRP13569 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
CFTRP13569 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CFTRP13569 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC30.56■■■□□ 2.48
CFTRP13569 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CFTRP13569 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CFTRP13569 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CFTRP13569 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
CFTRP13569 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC30.56■■■□□ 2.48
CFTRP13569 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
CFTRP13569 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC30.56■■■□□ 2.48
CFTRP13569 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
CFTRP13569 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC30.56■■■□□ 2.48
CFTRP13569 AC009093.7-201ENST00000623853 1223 ntBASIC30.56■■■□□ 2.48
CFTRP13569 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CFTRP13569 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
CFTRP13569 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC30.55■■■□□ 2.48
CFTRP13569 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CFTRP13569 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CFTRP13569 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CFTRP13569 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CFTRP13569 ESPNP-201ENST00000270691 2015 ntBASIC30.55■■■□□ 2.48
CFTRP13569 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC30.55■■■□□ 2.48
CFTRP13569 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC30.55■■■□□ 2.48
CFTRP13569 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CFTRP13569 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CFTRP13569 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CFTRP13569 PTCHD3P3-201ENST00000403073 906 ntBASIC30.55■■■□□ 2.48
CFTRP13569 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC30.55■■■□□ 2.48
CFTRP13569 SIGLEC30P-201ENST00000455569 941 ntBASIC30.55■■■□□ 2.48
CFTRP13569 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC30.55■■■□□ 2.48
CFTRP13569 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC30.55■■■□□ 2.48
CFTRP13569 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC30.55■■■□□ 2.48
CFTRP13569 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC30.55■■■□□ 2.48
CFTRP13569 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CFTRP13569 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms