Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.21■□□□□ 0.67
FAM228BP0C875 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM228BP0C875 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM228BP0C875 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.21■□□□□ 0.67
FAM228BP0C875 PVRIG2P-201ENST00000435460 978 ntBASIC19.21■□□□□ 0.67
FAM228BP0C875 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.21■□□□□ 0.67
FAM228BP0C875 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.21■□□□□ 0.67
FAM228BP0C875 PRORSD1P-202ENST00000563365 2154 ntBASIC19.21■□□□□ 0.67
FAM228BP0C875 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.21■□□□□ 0.67
FAM228BP0C875 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM228BP0C875 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FAM228BP0C875 AC009053.2-201ENST00000563701 2365 ntBASIC19.21■□□□□ 0.67
FAM228BP0C875 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.21■□□□□ 0.67
FAM228BP0C875 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.21■□□□□ 0.67
FAM228BP0C875 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
FAM228BP0C875 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
FAM228BP0C875 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM228BP0C875 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FAM228BP0C875 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
FAM228BP0C875 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
FAM228BP0C875 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM228BP0C875 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.2■□□□□ 0.66
FAM228BP0C875 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
FAM228BP0C875 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.2■□□□□ 0.66
FAM228BP0C875 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.2■□□□□ 0.66
FAM228BP0C875 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM228BP0C875 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM228BP0C875 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM228BP0C875 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.2■□□□□ 0.66
FAM228BP0C875 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
FAM228BP0C875 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
FAM228BP0C875 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM228BP0C875 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.2■□□□□ 0.66
FAM228BP0C875 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FAM228BP0C875 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.2■□□□□ 0.66
FAM228BP0C875 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.2■□□□□ 0.66
FAM228BP0C875 AL512604.3-201ENST00000569583 964 ntBASIC19.2■□□□□ 0.66
FAM228BP0C875 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.2■□□□□ 0.66
FAM228BP0C875 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM228BP0C875 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.2■□□□□ 0.66
FAM228BP0C875 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
FAM228BP0C875 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.2■□□□□ 0.66
FAM228BP0C875 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
FAM228BP0C875 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM228BP0C875 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM228BP0C875 AC133963.1-201ENST00000504166 1679 ntBASIC19.2■□□□□ 0.66
FAM228BP0C875 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM228BP0C875 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM228BP0C875 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FAM228BP0C875 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
FAM228BP0C875 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
FAM228BP0C875 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FAM228BP0C875 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FAM228BP0C875 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.19■□□□□ 0.66
FAM228BP0C875 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
FAM228BP0C875 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FAM228BP0C875 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.19■□□□□ 0.66
FAM228BP0C875 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FAM228BP0C875 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.19■□□□□ 0.66
FAM228BP0C875 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FAM228BP0C875 ECEL1P3-201ENST00000427961 737 ntBASIC19.19■□□□□ 0.66
FAM228BP0C875 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
FAM228BP0C875 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
FAM228BP0C875 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.19■□□□□ 0.66
FAM228BP0C875 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
FAM228BP0C875 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
FAM228BP0C875 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FAM228BP0C875 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.19■□□□□ 0.66
FAM228BP0C875 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FAM228BP0C875 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FAM228BP0C875 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FAM228BP0C875 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
FAM228BP0C875 HTR7P1-202ENST00000624664 4411 ntBASIC19.18■□□□□ 0.66
FAM228BP0C875 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM228BP0C875 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FAM228BP0C875 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FAM228BP0C875 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM228BP0C875 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.18■□□□□ 0.66
FAM228BP0C875 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM228BP0C875 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
FAM228BP0C875 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.18■□□□□ 0.66
FAM228BP0C875 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FAM228BP0C875 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM228BP0C875 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM228BP0C875 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM228BP0C875 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
FAM228BP0C875 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.18■□□□□ 0.66
FAM228BP0C875 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
FAM228BP0C875 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.18■□□□□ 0.66
FAM228BP0C875 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.18■□□□□ 0.66
FAM228BP0C875 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.18■□□□□ 0.66
FAM228BP0C875 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.18■□□□□ 0.66
FAM228BP0C875 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.18■□□□□ 0.66
FAM228BP0C875 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.18■□□□□ 0.66
FAM228BP0C875 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.18■□□□□ 0.66
FAM228BP0C875 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM228BP0C875 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM228BP0C875 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FAM228BP0C875 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FAM228BP0C875 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms