Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXC6P09630 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC6P09630 MIR1199-201ENST00000621445 119 ntBASIC20.26■□□□□ 0.83
HOXC6P09630 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC6P09630 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
HOXC6P09630 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC6P09630 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.26■□□□□ 0.83
HOXC6P09630 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC6P09630 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC6P09630 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
HOXC6P09630 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
HOXC6P09630 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC6P09630 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXC6P09630 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.25■□□□□ 0.83
HOXC6P09630 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC6P09630 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.25■□□□□ 0.83
HOXC6P09630 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC6P09630 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.25■□□□□ 0.83
HOXC6P09630 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.25■□□□□ 0.83
HOXC6P09630 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC6P09630 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HOXC6P09630 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC6P09630 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC6P09630 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC6P09630 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HOXC6P09630 RPS8P6-201ENST00000426177 609 ntBASIC20.25■□□□□ 0.83
HOXC6P09630 AP006288.1-201ENST00000446065 395 ntBASIC20.25■□□□□ 0.83
HOXC6P09630 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.25■□□□□ 0.83
HOXC6P09630 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.25■□□□□ 0.83
HOXC6P09630 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.25■□□□□ 0.83
HOXC6P09630 AC064836.3-201ENST00000607928 673 ntBASIC20.25■□□□□ 0.83
HOXC6P09630 AC005593.1-201ENST00000624894 515 ntBASIC20.25■□□□□ 0.83
HOXC6P09630 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.25■□□□□ 0.83
HOXC6P09630 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC6P09630 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.25■□□□□ 0.83
HOXC6P09630 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC6P09630 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HOXC6P09630 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC6P09630 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HOXC6P09630 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HOXC6P09630 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC6P09630 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.24■□□□□ 0.83
HOXC6P09630 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC6P09630 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.24■□□□□ 0.83
HOXC6P09630 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HOXC6P09630 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HOXC6P09630 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC6P09630 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC6P09630 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC6P09630 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC6P09630 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.24■□□□□ 0.83
HOXC6P09630 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.24■□□□□ 0.83
HOXC6P09630 AC023274.1-201ENST00000418278 595 ntBASIC20.24■□□□□ 0.83
HOXC6P09630 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.24■□□□□ 0.83
HOXC6P09630 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.24■□□□□ 0.83
HOXC6P09630 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.24■□□□□ 0.83
HOXC6P09630 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HOXC6P09630 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.24■□□□□ 0.83
HOXC6P09630 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.24■□□□□ 0.83
HOXC6P09630 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC6P09630 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC6P09630 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.24■□□□□ 0.83
HOXC6P09630 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC6P09630 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.24■□□□□ 0.83
HOXC6P09630 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC6P09630 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.24■□□□□ 0.83
HOXC6P09630 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC6P09630 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXC6P09630 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HOXC6P09630 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC6P09630 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC6P09630 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC6P09630 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HOXC6P09630 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC6P09630 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.23■□□□□ 0.83
HOXC6P09630 SPDYE21P-201ENST00000413323 827 ntBASIC20.23■□□□□ 0.83
HOXC6P09630 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXC6P09630 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXC6P09630 MCCD1P2-201ENST00000423228 335 ntBASIC20.23■□□□□ 0.83
HOXC6P09630 DNAJB3-202ENST00000449667 1266 ntBASIC20.23■□□□□ 0.83
HOXC6P09630 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.23■□□□□ 0.83
HOXC6P09630 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXC6P09630 AC136632.2-201ENST00000512891 861 ntBASIC20.23■□□□□ 0.83
HOXC6P09630 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HOXC6P09630 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
HOXC6P09630 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC6P09630 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC6P09630 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC6P09630 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
HOXC6P09630 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXC6P09630 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC6P09630 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC6P09630 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXC6P09630 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
HOXC6P09630 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.22■□□□□ 0.83
HOXC6P09630 AP000974.1-201ENST00000623909 2387 ntBASIC20.22■□□□□ 0.83
HOXC6P09630 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC6P09630 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXC6P09630 AC010460.3-201ENST00000511359 1579 ntBASIC20.22■□□□□ 0.83
HOXC6P09630 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms