Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
TPM1P09493 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TPM1P09493 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM1P09493 AC009065.1-201ENST00000564055 1225 ntBASIC19.86■□□□□ 0.77
TPM1P09493 AC006058.3-201ENST00000606217 1069 ntBASIC19.86■□□□□ 0.77
TPM1P09493 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TPM1P09493 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.86■□□□□ 0.77
TPM1P09493 AC080080.1-201ENST00000625121 2420 ntBASIC19.86■□□□□ 0.77
TPM1P09493 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM1P09493 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TPM1P09493 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TPM1P09493 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM1P09493 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TPM1P09493 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TPM1P09493 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
TPM1P09493 AC096733.2-201ENST00000609937 1394 ntBASIC19.85■□□□□ 0.77
TPM1P09493 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM1P09493 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TPM1P09493 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TPM1P09493 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM1P09493 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM1P09493 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM1P09493 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TPM1P09493 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TPM1P09493 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.85■□□□□ 0.77
TPM1P09493 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.85■□□□□ 0.77
TPM1P09493 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.85■□□□□ 0.77
TPM1P09493 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.85■□□□□ 0.77
TPM1P09493 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM1P09493 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.85■□□□□ 0.77
TPM1P09493 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.85■□□□□ 0.77
TPM1P09493 AC099343.3-201ENST00000605834 2503 ntBASIC19.85■□□□□ 0.77
TPM1P09493 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM1P09493 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM1P09493 AC108860.2-201ENST00000562760 2183 ntBASIC19.85■□□□□ 0.77
TPM1P09493 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.85■□□□□ 0.77
TPM1P09493 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.85■□□□□ 0.77
TPM1P09493 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM1P09493 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.85■□□□□ 0.77
TPM1P09493 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM1P09493 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM1P09493 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.85■□□□□ 0.77
TPM1P09493 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TPM1P09493 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TPM1P09493 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TPM1P09493 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TPM1P09493 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.85■□□□□ 0.77
TPM1P09493 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.84■□□□□ 0.77
TPM1P09493 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TPM1P09493 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM1P09493 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM1P09493 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM1P09493 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM1P09493 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TPM1P09493 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.84■□□□□ 0.77
TPM1P09493 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.84■□□□□ 0.77
TPM1P09493 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TPM1P09493 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TPM1P09493 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
TPM1P09493 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.84■□□□□ 0.77
TPM1P09493 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TPM1P09493 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TPM1P09493 MFAP1P1-201ENST00000442257 1255 ntBASIC19.84■□□□□ 0.77
TPM1P09493 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.84■□□□□ 0.77
TPM1P09493 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.84■□□□□ 0.77
TPM1P09493 SLC25A1P4-201ENST00000567977 778 ntBASIC19.84■□□□□ 0.77
TPM1P09493 DGCR10-201ENST00000609839 495 ntBASIC19.84■□□□□ 0.77
TPM1P09493 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.84■□□□□ 0.77
TPM1P09493 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.84■□□□□ 0.77
TPM1P09493 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM1P09493 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.84■□□□□ 0.77
TPM1P09493 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM1P09493 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM1P09493 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.84■□□□□ 0.77
TPM1P09493 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.84■□□□□ 0.77
TPM1P09493 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.84■□□□□ 0.77
TPM1P09493 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TPM1P09493 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
TPM1P09493 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TPM1P09493 PKD1P5-201ENST00000532415 10291 ntBASIC19.83■□□□□ 0.77
TPM1P09493 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TPM1P09493 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TPM1P09493 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.83■□□□□ 0.77
TPM1P09493 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.83■□□□□ 0.77
TPM1P09493 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TPM1P09493 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TPM1P09493 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.83■□□□□ 0.77
TPM1P09493 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TPM1P09493 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TPM1P09493 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TPM1P09493 CA15P1-201ENST00000481698 905 ntBASIC19.83■□□□□ 0.77
TPM1P09493 KRT18P6-201ENST00000555540 1265 ntBASIC19.83■□□□□ 0.77
TPM1P09493 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.83■□□□□ 0.77
TPM1P09493 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.83■□□□□ 0.77
TPM1P09493 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TPM1P09493 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPM1P09493 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPM1P09493 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPM1P09493 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TPM1P09493 AL023806.1-201ENST00000603994 1649 ntBASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms