Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRPRAP08240 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.13■□□□□ 0.49
SRPRAP08240 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SRPRAP08240 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRPRAP08240 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.13■□□□□ 0.49
SRPRAP08240 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.13■□□□□ 0.49
SRPRAP08240 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SRPRAP08240 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SRPRAP08240 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.13■□□□□ 0.49
SRPRAP08240 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SRPRAP08240 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SRPRAP08240 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRPRAP08240 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRPRAP08240 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRPRAP08240 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SRPRAP08240 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.12■□□□□ 0.49
SRPRAP08240 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRPRAP08240 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRPRAP08240 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SRPRAP08240 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SRPRAP08240 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRPRAP08240 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRPRAP08240 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.12■□□□□ 0.49
SRPRAP08240 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRPRAP08240 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRPRAP08240 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRPRAP08240 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
SRPRAP08240 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.12■□□□□ 0.49
SRPRAP08240 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRPRAP08240 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.12■□□□□ 0.49
SRPRAP08240 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SRPRAP08240 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.12■□□□□ 0.49
SRPRAP08240 AC007967.3-201ENST00000434308 558 ntBASIC18.12■□□□□ 0.49
SRPRAP08240 ABCD1P5-201ENST00000445663 754 ntBASIC18.12■□□□□ 0.49
SRPRAP08240 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
SRPRAP08240 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SRPRAP08240 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.12■□□□□ 0.49
SRPRAP08240 SLC25A6P4-201ENST00000586535 553 ntBASIC18.12■□□□□ 0.49
SRPRAP08240 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRPRAP08240 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SRPRAP08240 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.12■□□□□ 0.49
SRPRAP08240 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.12■□□□□ 0.49
SRPRAP08240 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SRPRAP08240 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRPRAP08240 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.12■□□□□ 0.49
SRPRAP08240 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRPRAP08240 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRPRAP08240 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.12■□□□□ 0.49
SRPRAP08240 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRPRAP08240 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SRPRAP08240 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.12■□□□□ 0.49
SRPRAP08240 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.12■□□□□ 0.49
SRPRAP08240 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRPRAP08240 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.12■□□□□ 0.49
SRPRAP08240 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.12■□□□□ 0.49
SRPRAP08240 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.11■□□□□ 0.49
SRPRAP08240 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRPRAP08240 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
SRPRAP08240 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.11■□□□□ 0.49
SRPRAP08240 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRPRAP08240 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRPRAP08240 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRPRAP08240 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.11■□□□□ 0.49
SRPRAP08240 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRPRAP08240 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRPRAP08240 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.11■□□□□ 0.49
SRPRAP08240 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.11■□□□□ 0.49
SRPRAP08240 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SRPRAP08240 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.11■□□□□ 0.49
SRPRAP08240 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SRPRAP08240 KRT8P47-201ENST00000604727 1398 ntBASIC18.11■□□□□ 0.49
SRPRAP08240 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
SRPRAP08240 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.11■□□□□ 0.49
SRPRAP08240 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRPRAP08240 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SRPRAP08240 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRPRAP08240 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SRPRAP08240 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRPRAP08240 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRPRAP08240 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRPRAP08240 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRPRAP08240 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.11■□□□□ 0.49
SRPRAP08240 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRPRAP08240 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SRPRAP08240 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.11■□□□□ 0.49
SRPRAP08240 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.11■□□□□ 0.49
SRPRAP08240 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SRPRAP08240 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRPRAP08240 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRPRAP08240 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRPRAP08240 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRPRAP08240 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRPRAP08240 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.1■□□□□ 0.49
SRPRAP08240 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SRPRAP08240 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.1■□□□□ 0.49
SRPRAP08240 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRPRAP08240 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRPRAP08240 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.1■□□□□ 0.49
SRPRAP08240 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRPRAP08240 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms