Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFTPBP07988 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFTPBP07988 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.67■□□□□ 0.1
SFTPBP07988 TERF1P1-201ENST00000311003 1181 ntBASIC15.67■□□□□ 0.1
SFTPBP07988 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFTPBP07988 AL137013.1-201ENST00000432946 1228 ntBASIC15.67■□□□□ 0.1
SFTPBP07988 AC128688.1-201ENST00000487626 519 ntBASIC15.67■□□□□ 0.1
SFTPBP07988 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.67■□□□□ 0.1
SFTPBP07988 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.67■□□□□ 0.1
SFTPBP07988 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.67■□□□□ 0.1
SFTPBP07988 AC010203.1-204ENST00000548782 407 ntBASIC15.67■□□□□ 0.1
SFTPBP07988 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.67■□□□□ 0.1
SFTPBP07988 MIR3180-5-201ENST00000583743 153 ntBASIC15.67■□□□□ 0.1
SFTPBP07988 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.67■□□□□ 0.1
SFTPBP07988 AC116562.4-202ENST00000641738 218 ntBASIC15.67■□□□□ 0.1
SFTPBP07988 AC092865.7-201ENST00000641832 219 ntBASIC15.67■□□□□ 0.1
SFTPBP07988 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFTPBP07988 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFTPBP07988 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFTPBP07988 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
SFTPBP07988 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SFTPBP07988 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.67■□□□□ 0.1
SFTPBP07988 AC008764.6-201ENST00000595909 2069 ntBASIC15.67■□□□□ 0.1
SFTPBP07988 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFTPBP07988 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.67■□□□□ 0.1
SFTPBP07988 PKD1P5-201ENST00000532415 10291 ntBASIC15.67■□□□□ 0.1
SFTPBP07988 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFTPBP07988 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.67■□□□□ 0.1
SFTPBP07988 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFTPBP07988 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SFTPBP07988 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SFTPBP07988 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFTPBP07988 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SFTPBP07988 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SFTPBP07988 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SFTPBP07988 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SFTPBP07988 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SFTPBP07988 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.66■□□□□ 0.1
SFTPBP07988 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SFTPBP07988 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 SLC25A1P2-201ENST00000430693 912 ntBASIC15.66■□□□□ 0.1
SFTPBP07988 CCR12P-201ENST00000446203 998 ntBASIC15.66■□□□□ 0.1
SFTPBP07988 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.66■□□□□ 0.1
SFTPBP07988 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SFTPBP07988 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.66■□□□□ 0.1
SFTPBP07988 AC010331.1-201ENST00000611423 582 ntBASIC15.66■□□□□ 0.1
SFTPBP07988 FAM87A-204ENST00000613235 858 ntBASIC15.66■□□□□ 0.1
SFTPBP07988 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SFTPBP07988 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SFTPBP07988 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.66■□□□□ 0.1
SFTPBP07988 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 AC036111.1-201ENST00000533973 1582 ntBASIC15.66■□□□□ 0.1
SFTPBP07988 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.66■□□□□ 0.1
SFTPBP07988 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTPBP07988 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SFTPBP07988 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SFTPBP07988 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.65■□□□□ 0.1
SFTPBP07988 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTPBP07988 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTPBP07988 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTPBP07988 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.65■□□□□ 0.1
SFTPBP07988 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.65■□□□□ 0.1
SFTPBP07988 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTPBP07988 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SFTPBP07988 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.65■□□□□ 0.1
SFTPBP07988 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.65■□□□□ 0.1
SFTPBP07988 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SFTPBP07988 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SFTPBP07988 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SFTPBP07988 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SFTPBP07988 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.65■□□□□ 0.1
SFTPBP07988 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTPBP07988 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SFTPBP07988 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTPBP07988 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTPBP07988 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SFTPBP07988 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SFTPBP07988 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTPBP07988 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SFTPBP07988 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTPBP07988 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SFTPBP07988 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SFTPBP07988 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTPBP07988 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms