Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RETP07949 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RETP07949 AC007613.1-201ENST00000572811 2597 ntBASIC18.14■□□□□ 0.49
RETP07949 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RETP07949 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.14■□□□□ 0.49
RETP07949 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RETP07949 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RETP07949 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.14■□□□□ 0.49
RETP07949 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.14■□□□□ 0.49
RETP07949 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RETP07949 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.14■□□□□ 0.49
RETP07949 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.14■□□□□ 0.49
RETP07949 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RETP07949 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RETP07949 AC090164.3-201ENST00000610780 2143 ntBASIC18.14■□□□□ 0.49
RETP07949 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RETP07949 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.14■□□□□ 0.49
RETP07949 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RETP07949 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.14■□□□□ 0.49
RETP07949 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RETP07949 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RETP07949 TP73-AS1-210ENST00000637775 1455 ntBASIC18.14■□□□□ 0.49
RETP07949 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.13■□□□□ 0.49
RETP07949 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.13■□□□□ 0.49
RETP07949 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RETP07949 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RETP07949 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RETP07949 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.13■□□□□ 0.49
RETP07949 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RETP07949 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RETP07949 Z83851.2-201ENST00000609564 659 ntBASIC18.13■□□□□ 0.49
RETP07949 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.13■□□□□ 0.49
RETP07949 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.13■□□□□ 0.49
RETP07949 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RETP07949 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
RETP07949 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RETP07949 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RETP07949 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RETP07949 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.13■□□□□ 0.49
RETP07949 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
RETP07949 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RETP07949 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RETP07949 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.12■□□□□ 0.49
RETP07949 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RETP07949 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RETP07949 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.12■□□□□ 0.49
RETP07949 AL390961.4-201ENST00000623958 2535 ntBASIC18.12■□□□□ 0.49
RETP07949 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RETP07949 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RETP07949 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RETP07949 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RETP07949 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RETP07949 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RETP07949 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.12■□□□□ 0.49
RETP07949 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.12■□□□□ 0.49
RETP07949 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.12■□□□□ 0.49
RETP07949 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.12■□□□□ 0.49
RETP07949 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.12■□□□□ 0.49
RETP07949 AC021087.4-201ENST00000563761 564 ntBASIC18.12■□□□□ 0.49
RETP07949 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.12■□□□□ 0.49
RETP07949 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.12■□□□□ 0.49
RETP07949 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RETP07949 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RETP07949 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RETP07949 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RETP07949 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RETP07949 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RETP07949 WIZP1-201ENST00000531444 2299 ntBASIC18.12■□□□□ 0.49
RETP07949 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RETP07949 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
RETP07949 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RETP07949 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.12■□□□□ 0.49
RETP07949 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RETP07949 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RETP07949 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RETP07949 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.12■□□□□ 0.49
RETP07949 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.12■□□□□ 0.49
RETP07949 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RETP07949 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.11■□□□□ 0.49
RETP07949 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RETP07949 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RETP07949 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.11■□□□□ 0.49
RETP07949 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RETP07949 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.11■□□□□ 0.49
RETP07949 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.11■□□□□ 0.49
RETP07949 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RETP07949 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.11■□□□□ 0.49
RETP07949 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.11■□□□□ 0.49
RETP07949 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RETP07949 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RETP07949 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RETP07949 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.11■□□□□ 0.49
RETP07949 AC092910.1-201ENST00000482027 1129 ntBASIC18.11■□□□□ 0.49
RETP07949 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.11■□□□□ 0.49
RETP07949 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RETP07949 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.11■□□□□ 0.49
RETP07949 AP001269.4-201ENST00000609611 512 ntBASIC18.11■□□□□ 0.49
RETP07949 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RETP07949 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.11■□□□□ 0.49
RETP07949 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms