Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CAPNS1P04632 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.9■□□□□ 0.46
CAPNS1P04632 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 SAPCD2P3-201ENST00000455031 850 ntBASIC17.9■□□□□ 0.46
CAPNS1P04632 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CAPNS1P04632 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.9■□□□□ 0.46
CAPNS1P04632 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.9■□□□□ 0.46
CAPNS1P04632 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CAPNS1P04632 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.9■□□□□ 0.46
CAPNS1P04632 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.9■□□□□ 0.46
CAPNS1P04632 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CAPNS1P04632 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.9■□□□□ 0.46
CAPNS1P04632 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.9■□□□□ 0.46
CAPNS1P04632 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.9■□□□□ 0.46
CAPNS1P04632 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.9■□□□□ 0.46
CAPNS1P04632 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CAPNS1P04632 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPNS1P04632 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CAPNS1P04632 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CAPNS1P04632 FEM1AP3-201ENST00000403722 1741 ntBASIC17.89■□□□□ 0.46
CAPNS1P04632 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CAPNS1P04632 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CAPNS1P04632 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPNS1P04632 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CAPNS1P04632 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPNS1P04632 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPNS1P04632 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPNS1P04632 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CAPNS1P04632 BX842568.4-201ENST00000421222 227 ntBASIC17.89■□□□□ 0.45
CAPNS1P04632 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.89■□□□□ 0.45
CAPNS1P04632 RNPS1P1-201ENST00000507437 918 ntBASIC17.89■□□□□ 0.45
CAPNS1P04632 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.89■□□□□ 0.45
CAPNS1P04632 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CAPNS1P04632 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.89■□□□□ 0.45
CAPNS1P04632 AC138894.3-201ENST00000603787 634 ntBASIC17.89■□□□□ 0.45
CAPNS1P04632 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPNS1P04632 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPNS1P04632 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.89■□□□□ 0.45
CAPNS1P04632 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.89■□□□□ 0.45
CAPNS1P04632 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPNS1P04632 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPNS1P04632 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CAPNS1P04632 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPNS1P04632 AC141586.5-201ENST00000624546 2050 ntBASIC17.89■□□□□ 0.45
CAPNS1P04632 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CAPNS1P04632 AC104417.2-201ENST00000562989 1793 ntBASIC17.89■□□□□ 0.45
CAPNS1P04632 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.88■□□□□ 0.45
CAPNS1P04632 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPNS1P04632 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CAPNS1P04632 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPNS1P04632 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPNS1P04632 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPNS1P04632 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
CAPNS1P04632 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPNS1P04632 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CAPNS1P04632 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CAPNS1P04632 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CAPNS1P04632 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPNS1P04632 SDHAP1-207ENST00000440850 2000 ntBASIC17.88■□□□□ 0.45
CAPNS1P04632 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.88■□□□□ 0.45
CAPNS1P04632 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPNS1P04632 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.88■□□□□ 0.45
CAPNS1P04632 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CAPNS1P04632 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPNS1P04632 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.88■□□□□ 0.45
CAPNS1P04632 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.88■□□□□ 0.45
CAPNS1P04632 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.88■□□□□ 0.45
CAPNS1P04632 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.88■□□□□ 0.45
CAPNS1P04632 AL773604.1-201ENST00000617417 272 ntBASIC17.88■□□□□ 0.45
CAPNS1P04632 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CAPNS1P04632 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPNS1P04632 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CAPNS1P04632 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPNS1P04632 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CAPNS1P04632 GNAS-203ENST00000306120 1878 ntBASIC17.88■□□□□ 0.45
CAPNS1P04632 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPNS1P04632 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.88■□□□□ 0.45
CAPNS1P04632 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.88■□□□□ 0.45
CAPNS1P04632 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CAPNS1P04632 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPNS1P04632 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms