Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.15■□□□□ 0.02
CD74P04233 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.15■□□□□ 0.02
CD74P04233 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD74P04233 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
CD74P04233 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD74P04233 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD74P04233 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CD74P04233 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.15■□□□□ 0.02
CD74P04233 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD74P04233 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD74P04233 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD74P04233 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CD74P04233 AL024508.2-201ENST00000607749 1894 ntBASIC15.14■□□□□ 0.01
CD74P04233 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
CD74P04233 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CD74P04233 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD74P04233 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD74P04233 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD74P04233 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD74P04233 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD74P04233 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CD74P04233 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD74P04233 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CD74P04233 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD74P04233 AC239809.2-201ENST00000415381 517 ntBASIC15.14■□□□□ 0.01
CD74P04233 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.14■□□□□ 0.01
CD74P04233 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.14■□□□□ 0.01
CD74P04233 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.14■□□□□ 0.01
CD74P04233 MIR3180-5-201ENST00000583743 153 ntBASIC15.14■□□□□ 0.01
CD74P04233 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CD74P04233 IKBKGP1-201ENST00000612193 1073 ntBASIC15.14■□□□□ 0.01
CD74P04233 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.14■□□□□ 0.01
CD74P04233 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD74P04233 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CD74P04233 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CD74P04233 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD74P04233 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD74P04233 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.14■□□□□ 0.01
CD74P04233 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CD74P04233 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
CD74P04233 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.14■□□□□ 0.01
CD74P04233 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD74P04233 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD74P04233 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD74P04233 CICP6-201ENST00000457191 2729 ntBASIC15.14■□□□□ 0.01
CD74P04233 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CD74P04233 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD74P04233 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.14■□□□□ 0.01
CD74P04233 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.14■□□□□ 0.01
CD74P04233 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD74P04233 UBALD1-205ENST00000590891 2641 ntBASIC15.13■□□□□ 0.01
CD74P04233 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD74P04233 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.13■□□□□ 0.01
CD74P04233 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CD74P04233 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CD74P04233 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CD74P04233 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CD74P04233 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.13■□□□□ 0.01
CD74P04233 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD74P04233 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.13■□□□□ 0.01
CD74P04233 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD74P04233 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD74P04233 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD74P04233 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD74P04233 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD74P04233 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.13■□□□□ 0.01
CD74P04233 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD74P04233 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CD74P04233 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.13■□□□□ 0.01
CD74P04233 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD74P04233 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD74P04233 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CD74P04233 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CD74P04233 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.13■□□□□ 0.01
CD74P04233 LINC01451-201ENST00000623792 534 ntBASIC15.13■□□□□ 0.01
CD74P04233 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD74P04233 AL023875.1-201ENST00000640777 796 ntBASIC15.13■□□□□ 0.01
CD74P04233 AC133041.1-202ENST00000642053 222 ntBASIC15.13■□□□□ 0.01
CD74P04233 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CD74P04233 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD74P04233 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.13■□□□□ 0.01
CD74P04233 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD74P04233 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD74P04233 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD74P04233 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.13■□□□□ 0.01
CD74P04233 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.13■□□□□ 0.01
CD74P04233 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.13■□□□□ 0.01
CD74P04233 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.13■□□□□ 0.01
CD74P04233 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CD74P04233 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CD74P04233 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD74P04233 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD74P04233 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD74P04233 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
CD74P04233 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.12■□□□□ 0.01
CD74P04233 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD74P04233 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.12■□□□□ 0.01
CD74P04233 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CD74P04233 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD74P04233 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms