Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.37■□□□□ 0.53
MT-ND3P03897 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MT-ND3P03897 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND3P03897 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.37■□□□□ 0.53
MT-ND3P03897 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.37■□□□□ 0.53
MT-ND3P03897 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.37■□□□□ 0.53
MT-ND3P03897 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.37■□□□□ 0.53
MT-ND3P03897 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.37■□□□□ 0.53
MT-ND3P03897 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MT-ND3P03897 AC008622.2-201ENST00000617006 1229 ntBASIC18.37■□□□□ 0.53
MT-ND3P03897 AC116562.4-202ENST00000641738 218 ntBASIC18.37■□□□□ 0.53
MT-ND3P03897 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MT-ND3P03897 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.37■□□□□ 0.53
MT-ND3P03897 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND3P03897 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.37■□□□□ 0.53
MT-ND3P03897 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND3P03897 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND3P03897 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND3P03897 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND3P03897 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND3P03897 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND3P03897 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND3P03897 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND3P03897 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
MT-ND3P03897 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
MT-ND3P03897 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND3P03897 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND3P03897 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND3P03897 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
MT-ND3P03897 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND3P03897 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND3P03897 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND3P03897 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MT-ND3P03897 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.36■□□□□ 0.53
MT-ND3P03897 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.36■□□□□ 0.53
MT-ND3P03897 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.36■□□□□ 0.53
MT-ND3P03897 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND3P03897 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.36■□□□□ 0.53
MT-ND3P03897 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
MT-ND3P03897 KRT8P50-201ENST00000562022 1438 ntBASIC18.36■□□□□ 0.53
MT-ND3P03897 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND3P03897 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
MT-ND3P03897 AC034236.2-201ENST00000606662 1610 ntBASIC18.36■□□□□ 0.53
MT-ND3P03897 AC096733.2-201ENST00000609937 1394 ntBASIC18.36■□□□□ 0.53
MT-ND3P03897 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
MT-ND3P03897 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.36■□□□□ 0.53
MT-ND3P03897 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.36■□□□□ 0.53
MT-ND3P03897 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
MT-ND3P03897 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND3P03897 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND3P03897 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MT-ND3P03897 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
MT-ND3P03897 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
MT-ND3P03897 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.35■□□□□ 0.53
MT-ND3P03897 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
MT-ND3P03897 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.35■□□□□ 0.53
MT-ND3P03897 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
MT-ND3P03897 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.35■□□□□ 0.53
MT-ND3P03897 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.35■□□□□ 0.53
MT-ND3P03897 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MT-ND3P03897 AL023284.2-201ENST00000405850 579 ntBASIC18.35■□□□□ 0.53
MT-ND3P03897 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.35■□□□□ 0.53
MT-ND3P03897 SLC25A1P2-201ENST00000430693 912 ntBASIC18.35■□□□□ 0.53
MT-ND3P03897 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.35■□□□□ 0.53
MT-ND3P03897 MFAP1P1-201ENST00000442257 1255 ntBASIC18.35■□□□□ 0.53
MT-ND3P03897 ECEL1P2-202ENST00000465689 757 ntBASIC18.35■□□□□ 0.53
MT-ND3P03897 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
MT-ND3P03897 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.35■□□□□ 0.53
MT-ND3P03897 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.35■□□□□ 0.53
MT-ND3P03897 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.35■□□□□ 0.53
MT-ND3P03897 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
MT-ND3P03897 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.35■□□□□ 0.53
MT-ND3P03897 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
MT-ND3P03897 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MT-ND3P03897 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
MT-ND3P03897 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND3P03897 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MT-ND3P03897 AC006116.8-202ENST00000587620 1550 ntBASIC18.34■□□□□ 0.53
MT-ND3P03897 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
MT-ND3P03897 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MT-ND3P03897 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms