Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.8■□□□□ 0.6
LMNAP02545 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNAP02545 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.8■□□□□ 0.6
LMNAP02545 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.8■□□□□ 0.6
LMNAP02545 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
LMNAP02545 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.8■□□□□ 0.6
LMNAP02545 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.8■□□□□ 0.6
LMNAP02545 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.8■□□□□ 0.6
LMNAP02545 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNAP02545 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNAP02545 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LMNAP02545 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.79■□□□□ 0.6
LMNAP02545 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNAP02545 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNAP02545 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
LMNAP02545 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.79■□□□□ 0.6
LMNAP02545 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.79■□□□□ 0.6
LMNAP02545 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
LMNAP02545 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNAP02545 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.79■□□□□ 0.6
LMNAP02545 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LMNAP02545 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LMNAP02545 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.79■□□□□ 0.6
LMNAP02545 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNAP02545 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNAP02545 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LMNAP02545 MIR564-202ENST00000385049 94 ntBASIC18.79■□□□□ 0.6
LMNAP02545 AL031284.1-201ENST00000419297 478 ntBASIC18.79■□□□□ 0.6
LMNAP02545 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.79■□□□□ 0.6
LMNAP02545 RNF126P1-202ENST00000569893 925 ntBASIC18.79■□□□□ 0.6
LMNAP02545 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNAP02545 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNAP02545 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.79■□□□□ 0.6
LMNAP02545 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LMNAP02545 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNAP02545 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LMNAP02545 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LMNAP02545 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMNAP02545 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LMNAP02545 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.79■□□□□ 0.6
LMNAP02545 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.79■□□□□ 0.6
LMNAP02545 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LMNAP02545 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNAP02545 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LMNAP02545 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.78■□□□□ 0.6
LMNAP02545 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.78■□□□□ 0.6
LMNAP02545 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.78■□□□□ 0.6
LMNAP02545 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LMNAP02545 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.78■□□□□ 0.6
LMNAP02545 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNAP02545 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNAP02545 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.78■□□□□ 0.6
LMNAP02545 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNAP02545 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LMNAP02545 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.78■□□□□ 0.6
LMNAP02545 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.78■□□□□ 0.6
LMNAP02545 FAM197Y8-203ENST00000450145 560 ntBASIC18.78■□□□□ 0.6
LMNAP02545 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LMNAP02545 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.78■□□□□ 0.6
LMNAP02545 AF238378.1-201ENST00000526806 358 ntBASIC18.78■□□□□ 0.6
LMNAP02545 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.78■□□□□ 0.6
LMNAP02545 IGHV3-41-201ENST00000613121 348 ntBASIC18.78■□□□□ 0.6
LMNAP02545 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.78■□□□□ 0.6
LMNAP02545 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LMNAP02545 TP73-AS1-207ENST00000624167 988 ntBASIC18.78■□□□□ 0.6
LMNAP02545 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
LMNAP02545 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNAP02545 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNAP02545 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LMNAP02545 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNAP02545 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNAP02545 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
LMNAP02545 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.78■□□□□ 0.6
LMNAP02545 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNAP02545 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNAP02545 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNAP02545 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LMNAP02545 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LMNAP02545 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
LMNAP02545 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNAP02545 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNAP02545 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNAP02545 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LMNAP02545 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LMNAP02545 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMNAP02545 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LMNAP02545 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LMNAP02545 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
LMNAP02545 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LMNAP02545 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LMNAP02545 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LMNAP02545 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LMNAP02545 AL391807.1-203ENST00000604392 2365 ntBASIC18.77■□□□□ 0.6
LMNAP02545 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LMNAP02545 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LMNAP02545 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LMNAP02545 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LMNAP02545 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
LMNAP02545 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LMNAP02545 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms