Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFBP01127 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFBP01127 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
PDGFBP01127 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFBP01127 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFBP01127 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PDGFBP01127 AC148477.5-201ENST00000625164 1645 ntBASIC17.99■□□□□ 0.47
PDGFBP01127 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFBP01127 AC236430.1-201ENST00000402231 743 ntBASIC17.99■□□□□ 0.47
PDGFBP01127 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.99■□□□□ 0.47
PDGFBP01127 PMS2P4-201ENST00000412466 1052 ntBASIC17.99■□□□□ 0.47
PDGFBP01127 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.99■□□□□ 0.47
PDGFBP01127 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.99■□□□□ 0.47
PDGFBP01127 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFBP01127 AC010654.1-201ENST00000615722 808 ntBASIC17.99■□□□□ 0.47
PDGFBP01127 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PDGFBP01127 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFBP01127 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PDGFBP01127 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFBP01127 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
PDGFBP01127 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFBP01127 PCDHAC2-203ENST00000615316 3011 ntBASIC17.98■□□□□ 0.47
PDGFBP01127 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.98■□□□□ 0.47
PDGFBP01127 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
PDGFBP01127 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFBP01127 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFBP01127 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PDGFBP01127 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.98■□□□□ 0.47
PDGFBP01127 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFBP01127 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFBP01127 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFBP01127 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.98■□□□□ 0.47
PDGFBP01127 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.98■□□□□ 0.47
PDGFBP01127 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.98■□□□□ 0.47
PDGFBP01127 AC023141.5-201ENST00000458585 616 ntBASIC17.98■□□□□ 0.47
PDGFBP01127 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.98■□□□□ 0.47
PDGFBP01127 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.98■□□□□ 0.47
PDGFBP01127 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.98■□□□□ 0.47
PDGFBP01127 AC022145.2-201ENST00000598203 171 ntBASIC17.98■□□□□ 0.47
PDGFBP01127 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFBP01127 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFBP01127 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.98■□□□□ 0.47
PDGFBP01127 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.98■□□□□ 0.47
PDGFBP01127 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFBP01127 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PDGFBP01127 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFBP01127 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFBP01127 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PDGFBP01127 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PDGFBP01127 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFBP01127 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PDGFBP01127 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDGFBP01127 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
PDGFBP01127 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.98■□□□□ 0.47
PDGFBP01127 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.98■□□□□ 0.47
PDGFBP01127 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.98■□□□□ 0.47
PDGFBP01127 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFBP01127 AL157384.1-201ENST00000445995 2473 ntBASIC17.97■□□□□ 0.47
PDGFBP01127 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PDGFBP01127 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFBP01127 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
PDGFBP01127 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFBP01127 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFBP01127 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.97■□□□□ 0.47
PDGFBP01127 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFBP01127 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFBP01127 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFBP01127 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFBP01127 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFBP01127 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.97■□□□□ 0.47
PDGFBP01127 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFBP01127 MIR661-201ENST00000384842 89 ntBASIC17.97■□□□□ 0.47
PDGFBP01127 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.97■□□□□ 0.47
PDGFBP01127 AL020989.1-201ENST00000422979 469 ntBASIC17.97■□□□□ 0.47
PDGFBP01127 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.97■□□□□ 0.47
PDGFBP01127 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.97■□□□□ 0.47
PDGFBP01127 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.97■□□□□ 0.47
PDGFBP01127 AC122714.2-201ENST00000502787 707 ntBASIC17.97■□□□□ 0.47
PDGFBP01127 RNA5SP421-201ENST00000516864 134 ntBASIC17.97■□□□□ 0.47
PDGFBP01127 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.97■□□□□ 0.47
PDGFBP01127 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFBP01127 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.97■□□□□ 0.47
PDGFBP01127 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.97■□□□□ 0.47
PDGFBP01127 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.97■□□□□ 0.47
PDGFBP01127 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.97■□□□□ 0.47
PDGFBP01127 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PDGFBP01127 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFBP01127 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFBP01127 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.97■□□□□ 0.47
PDGFBP01127 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PDGFBP01127 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFBP01127 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDGFBP01127 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFBP01127 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.96■□□□□ 0.47
PDGFBP01127 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFBP01127 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PDGFBP01127 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.96■□□□□ 0.47
PDGFBP01127 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.96■□□□□ 0.47
PDGFBP01127 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDGFBP01127 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms