Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-CO1P00395 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MT-CO1P00395 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.45■□□□□ 0.54
MT-CO1P00395 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.45■□□□□ 0.54
MT-CO1P00395 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MT-CO1P00395 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.45■□□□□ 0.54
MT-CO1P00395 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.45■□□□□ 0.54
MT-CO1P00395 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
MT-CO1P00395 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 LINC00167-201ENST00000530583 1419 ntBASIC18.44■□□□□ 0.54
MT-CO1P00395 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 AL845331.1-201ENST00000424978 1190 ntBASIC18.44■□□□□ 0.54
MT-CO1P00395 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.44■□□□□ 0.54
MT-CO1P00395 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.44■□□□□ 0.54
MT-CO1P00395 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.44■□□□□ 0.54
MT-CO1P00395 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.44■□□□□ 0.54
MT-CO1P00395 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.44■□□□□ 0.54
MT-CO1P00395 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
MT-CO1P00395 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
MT-CO1P00395 PHGDH-209ENST00000641074 1780 ntBASIC18.44■□□□□ 0.54
MT-CO1P00395 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
MT-CO1P00395 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
MT-CO1P00395 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-CO1P00395 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
MT-CO1P00395 FZD10-202ENST00000539839 3282 ntBASIC18.43■□□□□ 0.54
MT-CO1P00395 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MT-CO1P00395 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MT-CO1P00395 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.43■□□□□ 0.54
MT-CO1P00395 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-CO1P00395 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MT-CO1P00395 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.43■□□□□ 0.54
MT-CO1P00395 AC091607.1-201ENST00000490318 1060 ntBASIC18.43■□□□□ 0.54
MT-CO1P00395 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.43■□□□□ 0.54
MT-CO1P00395 AP000867.3-201ENST00000524675 377 ntBASIC18.43■□□□□ 0.54
MT-CO1P00395 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.43■□□□□ 0.54
MT-CO1P00395 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.43■□□□□ 0.54
MT-CO1P00395 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-CO1P00395 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.43■□□□□ 0.54
MT-CO1P00395 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.43■□□□□ 0.54
MT-CO1P00395 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.43■□□□□ 0.54
MT-CO1P00395 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MT-CO1P00395 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
MT-CO1P00395 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MT-CO1P00395 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.43■□□□□ 0.54
MT-CO1P00395 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
MT-CO1P00395 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MT-CO1P00395 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-CO1P00395 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-CO1P00395 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-CO1P00395 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
MT-CO1P00395 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MT-CO1P00395 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-CO1P00395 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-CO1P00395 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-CO1P00395 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
MT-CO1P00395 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-CO1P00395 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
MT-CO1P00395 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
MT-CO1P00395 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-CO1P00395 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
MT-CO1P00395 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MT-CO1P00395 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.42■□□□□ 0.54
MT-CO1P00395 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-CO1P00395 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-CO1P00395 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-CO1P00395 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MT-CO1P00395 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-CO1P00395 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-CO1P00395 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
MT-CO1P00395 TSPY12P-201ENST00000421279 868 ntBASIC18.42■□□□□ 0.54
MT-CO1P00395 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MT-CO1P00395 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.42■□□□□ 0.54
MT-CO1P00395 MIR3652-201ENST00000579335 131 ntBASIC18.42■□□□□ 0.54
MT-CO1P00395 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
MT-CO1P00395 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.42■□□□□ 0.54
MT-CO1P00395 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
MT-CO1P00395 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
MT-CO1P00395 LETM1P2-201ENST00000597330 2178 ntBASIC18.42■□□□□ 0.54
MT-CO1P00395 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MT-CO1P00395 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.42■□□□□ 0.54
MT-CO1P00395 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-CO1P00395 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MT-CO1P00395 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-CO1P00395 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms