Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 METTL21AP1-201ENST00000438852 635 ntBASIC23.7■■□□□ 1.39
LTN1O94822 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC23.7■■□□□ 1.39
LTN1O94822 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC23.7■■□□□ 1.39
LTN1O94822 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC23.7■■□□□ 1.39
LTN1O94822 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC23.7■■□□□ 1.39
LTN1O94822 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
LTN1O94822 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC23.7■■□□□ 1.39
LTN1O94822 AC010654.1-201ENST00000615722 808 ntBASIC23.7■■□□□ 1.39
LTN1O94822 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
LTN1O94822 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LTN1O94822 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LTN1O94822 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC23.7■■□□□ 1.38
LTN1O94822 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LTN1O94822 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LTN1O94822 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
LTN1O94822 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
LTN1O94822 MCCD1P2-201ENST00000423228 335 ntBASIC23.7■■□□□ 1.38
LTN1O94822 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LTN1O94822 PON3-205ENST00000451904 1053 ntTSL 3 BASIC23.7■■□□□ 1.38
LTN1O94822 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC23.7■■□□□ 1.38
LTN1O94822 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC23.7■■□□□ 1.38
LTN1O94822 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC23.7■■□□□ 1.38
LTN1O94822 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC23.7■■□□□ 1.38
LTN1O94822 AL805961.1-202ENST00000641562 540 ntBASIC23.7■■□□□ 1.38
LTN1O94822 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LTN1O94822 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LTN1O94822 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LTN1O94822 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LTN1O94822 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
LTN1O94822 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LTN1O94822 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC23.69■■□□□ 1.38
LTN1O94822 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LTN1O94822 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
LTN1O94822 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LTN1O94822 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LTN1O94822 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
LTN1O94822 CRYGEP-201ENST00000412192 528 ntBASIC23.69■■□□□ 1.38
LTN1O94822 S100A2-206ENST00000497140 697 ntTSL 2 BASIC23.69■■□□□ 1.38
LTN1O94822 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC23.69■■□□□ 1.38
LTN1O94822 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC23.69■■□□□ 1.38
LTN1O94822 AL589182.2-201ENST00000619332 1049 ntBASIC23.69■■□□□ 1.38
LTN1O94822 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
LTN1O94822 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
LTN1O94822 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
LTN1O94822 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
LTN1O94822 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
LTN1O94822 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
LTN1O94822 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LTN1O94822 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LTN1O94822 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
LTN1O94822 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
LTN1O94822 AL020989.1-201ENST00000422979 469 ntBASIC23.68■■□□□ 1.38
LTN1O94822 MIR4751-201ENST00000578027 74 ntBASIC23.68■■□□□ 1.38
LTN1O94822 CYB561-217ENST00000582997 877 ntTSL 5 BASIC23.68■■□□□ 1.38
LTN1O94822 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC23.68■■□□□ 1.38
LTN1O94822 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC23.68■■□□□ 1.38
LTN1O94822 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC23.68■■□□□ 1.38
LTN1O94822 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC23.68■■□□□ 1.38
LTN1O94822 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.68■■□□□ 1.38
LTN1O94822 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LTN1O94822 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LTN1O94822 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
LTN1O94822 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LTN1O94822 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LTN1O94822 AC211486.1-202ENST00000416371 468 ntBASIC23.68■■□□□ 1.38
LTN1O94822 HCG4B-203ENST00000450128 991 ntBASIC23.68■■□□□ 1.38
LTN1O94822 AC211476.1-201ENST00000503899 468 ntBASIC23.68■■□□□ 1.38
LTN1O94822 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC23.68■■□□□ 1.38
LTN1O94822 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
LTN1O94822 AC004706.3-202ENST00000621574 984 ntBASIC23.68■■□□□ 1.38
LTN1O94822 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LTN1O94822 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC23.68■■□□□ 1.38
LTN1O94822 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LTN1O94822 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LTN1O94822 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LTN1O94822 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LTN1O94822 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC23.67■■□□□ 1.38
LTN1O94822 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC23.67■■□□□ 1.38
LTN1O94822 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC23.67■■□□□ 1.38
LTN1O94822 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LTN1O94822 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC23.67■■□□□ 1.38
LTN1O94822 AC027796.2-201ENST00000575326 344 ntBASIC23.67■■□□□ 1.38
LTN1O94822 AL355385.1-201ENST00000606123 409 ntBASIC23.67■■□□□ 1.38
LTN1O94822 AC008667.4-201ENST00000607370 168 ntBASIC23.67■■□□□ 1.38
LTN1O94822 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC23.67■■□□□ 1.38
LTN1O94822 AC010507.1-201ENST00000633895 436 ntBASIC23.67■■□□□ 1.38
LTN1O94822 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LTN1O94822 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LTN1O94822 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LTN1O94822 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LTN1O94822 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
LTN1O94822 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LTN1O94822 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC23.66■■□□□ 1.38
LTN1O94822 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LTN1O94822 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC23.66■■□□□ 1.38
LTN1O94822 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
LTN1O94822 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC23.66■■□□□ 1.38
LTN1O94822 MIR3687-2-201ENST00000577708 61 ntBASIC23.66■■□□□ 1.38
LTN1O94822 MTDHP5-201ENST00000598980 586 ntBASIC23.66■■□□□ 1.38
LTN1O94822 AC027612.4-201ENST00000605371 583 ntBASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms