Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.23■□□□□ 0.19
PTP4A3O75365 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.23■□□□□ 0.19
PTP4A3O75365 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PTP4A3O75365 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.23■□□□□ 0.19
PTP4A3O75365 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.23■□□□□ 0.19
PTP4A3O75365 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.23■□□□□ 0.19
PTP4A3O75365 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.23■□□□□ 0.19
PTP4A3O75365 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.23■□□□□ 0.19
PTP4A3O75365 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
PTP4A3O75365 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTP4A3O75365 AC133963.1-201ENST00000504166 1679 ntBASIC16.23■□□□□ 0.19
PTP4A3O75365 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTP4A3O75365 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.23■□□□□ 0.19
PTP4A3O75365 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PTP4A3O75365 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PTP4A3O75365 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PTP4A3O75365 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PTP4A3O75365 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTP4A3O75365 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTP4A3O75365 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTP4A3O75365 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTP4A3O75365 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTP4A3O75365 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTP4A3O75365 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.22■□□□□ 0.19
PTP4A3O75365 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.22■□□□□ 0.19
PTP4A3O75365 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTP4A3O75365 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PTP4A3O75365 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PTP4A3O75365 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTP4A3O75365 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.22■□□□□ 0.19
PTP4A3O75365 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTP4A3O75365 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTP4A3O75365 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTP4A3O75365 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.22■□□□□ 0.19
PTP4A3O75365 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PTP4A3O75365 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTP4A3O75365 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.22■□□□□ 0.19
PTP4A3O75365 ECEL1P3-201ENST00000427961 737 ntBASIC16.22■□□□□ 0.19
PTP4A3O75365 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.22■□□□□ 0.19
PTP4A3O75365 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.22■□□□□ 0.19
PTP4A3O75365 AC113404.2-201ENST00000507884 177 ntBASIC16.22■□□□□ 0.19
PTP4A3O75365 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.22■□□□□ 0.19
PTP4A3O75365 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.22■□□□□ 0.19
PTP4A3O75365 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PTP4A3O75365 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.22■□□□□ 0.19
PTP4A3O75365 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTP4A3O75365 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
PTP4A3O75365 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTP4A3O75365 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTP4A3O75365 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PTP4A3O75365 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
PTP4A3O75365 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTP4A3O75365 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTP4A3O75365 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.22■□□□□ 0.19
PTP4A3O75365 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.22■□□□□ 0.19
PTP4A3O75365 LINC00602-201ENST00000629776 2065 ntBASIC16.22■□□□□ 0.19
PTP4A3O75365 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTP4A3O75365 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTP4A3O75365 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTP4A3O75365 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.21■□□□□ 0.19
PTP4A3O75365 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
PTP4A3O75365 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.21■□□□□ 0.19
PTP4A3O75365 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.21■□□□□ 0.19
PTP4A3O75365 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PTP4A3O75365 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTP4A3O75365 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTP4A3O75365 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PTP4A3O75365 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTP4A3O75365 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTP4A3O75365 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.21■□□□□ 0.19
PTP4A3O75365 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PTP4A3O75365 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTP4A3O75365 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTP4A3O75365 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTP4A3O75365 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTP4A3O75365 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTP4A3O75365 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTP4A3O75365 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PTP4A3O75365 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTP4A3O75365 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTP4A3O75365 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.21■□□□□ 0.19
PTP4A3O75365 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
PTP4A3O75365 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTP4A3O75365 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTP4A3O75365 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTP4A3O75365 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.21■□□□□ 0.19
PTP4A3O75365 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTP4A3O75365 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTP4A3O75365 AL138688.1-201ENST00000624851 1594 ntBASIC16.21■□□□□ 0.18
PTP4A3O75365 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTP4A3O75365 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTP4A3O75365 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTP4A3O75365 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.2■□□□□ 0.18
PTP4A3O75365 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTP4A3O75365 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.2■□□□□ 0.18
PTP4A3O75365 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTP4A3O75365 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
PTP4A3O75365 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PTP4A3O75365 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTP4A3O75365 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms