Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
BRD4O60885 POR-209ENST00000439269 1858 ntTSL 2 BASIC24.84■■□□□ 1.57
BRD4O60885 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
BRD4O60885 INTS4P1-201ENST00000438455 1935 ntBASIC24.84■■□□□ 1.57
BRD4O60885 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
BRD4O60885 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
BRD4O60885 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
BRD4O60885 SLC25A1P1-201ENST00000528351 927 ntBASIC24.84■■□□□ 1.57
BRD4O60885 AC148477.8-201ENST00000624298 468 ntBASIC24.84■■□□□ 1.57
BRD4O60885 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
BRD4O60885 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
BRD4O60885 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
BRD4O60885 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
BRD4O60885 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
BRD4O60885 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
BRD4O60885 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC24.83■■□□□ 1.57
BRD4O60885 AC093909.1-201ENST00000504731 1122 ntBASIC24.83■■□□□ 1.57
BRD4O60885 KRT18P58-201ENST00000527480 1120 ntBASIC24.83■■□□□ 1.57
BRD4O60885 AC243591.1-201ENST00000452967 1364 ntBASIC24.83■■□□□ 1.57
BRD4O60885 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
BRD4O60885 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
BRD4O60885 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
BRD4O60885 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
BRD4O60885 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
BRD4O60885 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
BRD4O60885 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
BRD4O60885 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
BRD4O60885 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
BRD4O60885 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
BRD4O60885 FLYWCH1P1-201ENST00000460917 1874 ntBASIC24.82■■□□□ 1.56
BRD4O60885 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
BRD4O60885 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC24.82■■□□□ 1.56
BRD4O60885 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
BRD4O60885 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
BRD4O60885 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC24.82■■□□□ 1.56
BRD4O60885 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC24.82■■□□□ 1.56
BRD4O60885 AC106730.1-201ENST00000566722 1090 ntBASIC24.82■■□□□ 1.56
BRD4O60885 COX5A-204ENST00000567270 579 ntTSL 3 BASIC24.82■■□□□ 1.56
BRD4O60885 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
BRD4O60885 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC24.82■■□□□ 1.56
BRD4O60885 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
BRD4O60885 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
BRD4O60885 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC24.82■■□□□ 1.56
BRD4O60885 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
BRD4O60885 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
BRD4O60885 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC24.82■■□□□ 1.56
BRD4O60885 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC24.82■■□□□ 1.56
BRD4O60885 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
BRD4O60885 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
BRD4O60885 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
BRD4O60885 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
BRD4O60885 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC24.82■■□□□ 1.56
BRD4O60885 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
BRD4O60885 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC24.82■■□□□ 1.56
BRD4O60885 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC24.82■■□□□ 1.56
BRD4O60885 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
BRD4O60885 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC24.82■■□□□ 1.56
BRD4O60885 PAN3-AS1-201ENST00000563843 1351 ntBASIC24.81■■□□□ 1.56
BRD4O60885 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
BRD4O60885 HIST2H3DP1-201ENST00000401004 416 ntBASIC24.81■■□□□ 1.56
BRD4O60885 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC24.81■■□□□ 1.56
BRD4O60885 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC24.81■■□□□ 1.56
BRD4O60885 AC073648.2-201ENST00000510116 352 ntBASIC24.81■■□□□ 1.56
BRD4O60885 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC24.81■■□□□ 1.56
BRD4O60885 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC24.81■■□□□ 1.56
BRD4O60885 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC24.81■■□□□ 1.56
BRD4O60885 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC24.81■■□□□ 1.56
BRD4O60885 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC24.81■■□□□ 1.56
BRD4O60885 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
BRD4O60885 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
BRD4O60885 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
BRD4O60885 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC24.81■■□□□ 1.56
BRD4O60885 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
BRD4O60885 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
BRD4O60885 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
BRD4O60885 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC24.81■■□□□ 1.56
BRD4O60885 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
BRD4O60885 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC24.81■■□□□ 1.56
BRD4O60885 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
BRD4O60885 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
BRD4O60885 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC24.8■■□□□ 1.56
BRD4O60885 AC139887.3-201ENST00000568585 713 ntBASIC24.8■■□□□ 1.56
BRD4O60885 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
BRD4O60885 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
BRD4O60885 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
BRD4O60885 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC24.8■■□□□ 1.56
BRD4O60885 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
BRD4O60885 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
BRD4O60885 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
BRD4O60885 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC24.8■■□□□ 1.56
BRD4O60885 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
BRD4O60885 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
BRD4O60885 GMCL1P1-201ENST00000463439 1581 ntBASIC24.8■■□□□ 1.56
BRD4O60885 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC24.8■■□□□ 1.56
BRD4O60885 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
BRD4O60885 AC125634.1-201ENST00000438758 1403 ntBASIC24.8■■□□□ 1.56
BRD4O60885 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC24.8■■□□□ 1.56
BRD4O60885 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
BRD4O60885 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC24.8■■□□□ 1.56
BRD4O60885 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms