Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 VENTXP7-201ENST00000475503 772 ntBASIC18.25■□□□□ 0.51
PRAMEF11O60813 AC091607.1-201ENST00000490318 1060 ntBASIC18.25■□□□□ 0.51
PRAMEF11O60813 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.25■□□□□ 0.51
PRAMEF11O60813 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.25■□□□□ 0.51
PRAMEF11O60813 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF11O60813 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF11O60813 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.25■□□□□ 0.51
PRAMEF11O60813 AP005901.3-202ENST00000581653 237 ntBASIC18.25■□□□□ 0.51
PRAMEF11O60813 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.25■□□□□ 0.51
PRAMEF11O60813 AC092329.2-201ENST00000598402 547 ntBASIC18.25■□□□□ 0.51
PRAMEF11O60813 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.25■□□□□ 0.51
PRAMEF11O60813 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF11O60813 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF11O60813 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.25■□□□□ 0.51
PRAMEF11O60813 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF11O60813 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF11O60813 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF11O60813 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF11O60813 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF11O60813 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF11O60813 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF11O60813 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PRAMEF11O60813 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRAMEF11O60813 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF11O60813 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF11O60813 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF11O60813 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF11O60813 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF11O60813 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF11O60813 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF11O60813 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF11O60813 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PRAMEF11O60813 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEF11O60813 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PRAMEF11O60813 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF11O60813 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PRAMEF11O60813 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEF11O60813 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.24■□□□□ 0.51
PRAMEF11O60813 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF11O60813 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.24■□□□□ 0.51
PRAMEF11O60813 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEF11O60813 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.24■□□□□ 0.51
PRAMEF11O60813 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.24■□□□□ 0.51
PRAMEF11O60813 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF11O60813 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF11O60813 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PRAMEF11O60813 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF11O60813 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRAMEF11O60813 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 RNF165-205ENST00000588679 2904 ntBASIC18.23■□□□□ 0.51
PRAMEF11O60813 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 AC007613.1-201ENST00000572811 2597 ntBASIC18.23■□□□□ 0.51
PRAMEF11O60813 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 AC005336.2-201ENST00000593183 939 ntBASIC18.23■□□□□ 0.51
PRAMEF11O60813 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PRAMEF11O60813 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PRAMEF11O60813 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PRAMEF11O60813 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PRAMEF11O60813 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF11O60813 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF11O60813 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF11O60813 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF11O60813 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF11O60813 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF11O60813 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF11O60813 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF11O60813 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF11O60813 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms