Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.74■□□□□ 0.43
SNX3O60493 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SNX3O60493 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SNX3O60493 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX3O60493 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.74■□□□□ 0.43
SNX3O60493 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.74■□□□□ 0.43
SNX3O60493 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SNX3O60493 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX3O60493 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SNX3O60493 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.74■□□□□ 0.43
SNX3O60493 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX3O60493 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX3O60493 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNX3O60493 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX3O60493 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX3O60493 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX3O60493 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.74■□□□□ 0.43
SNX3O60493 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.73■□□□□ 0.43
SNX3O60493 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.73■□□□□ 0.43
SNX3O60493 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SNX3O60493 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.73■□□□□ 0.43
SNX3O60493 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SNX3O60493 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.73■□□□□ 0.43
SNX3O60493 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.73■□□□□ 0.43
SNX3O60493 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.73■□□□□ 0.43
SNX3O60493 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
SNX3O60493 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.73■□□□□ 0.43
SNX3O60493 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.73■□□□□ 0.43
SNX3O60493 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.73■□□□□ 0.43
SNX3O60493 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.73■□□□□ 0.43
SNX3O60493 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SNX3O60493 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX3O60493 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SNX3O60493 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX3O60493 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX3O60493 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX3O60493 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.72■□□□□ 0.43
SNX3O60493 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX3O60493 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX3O60493 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.72■□□□□ 0.43
SNX3O60493 PCDHB17P-201ENST00000539533 2393 ntBASIC17.72■□□□□ 0.43
SNX3O60493 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX3O60493 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.72■□□□□ 0.43
SNX3O60493 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.72■□□□□ 0.43
SNX3O60493 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
SNX3O60493 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX3O60493 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX3O60493 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SNX3O60493 PRKY-204ENST00000533551 1019 ntBASIC17.72■□□□□ 0.43
SNX3O60493 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX3O60493 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.72■□□□□ 0.43
SNX3O60493 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.72■□□□□ 0.43
SNX3O60493 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.72■□□□□ 0.43
SNX3O60493 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX3O60493 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SNX3O60493 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX3O60493 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SNX3O60493 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX3O60493 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SNX3O60493 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX3O60493 AC026691.1-201ENST00000602502 2017 ntBASIC17.72■□□□□ 0.43
SNX3O60493 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SNX3O60493 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.72■□□□□ 0.43
SNX3O60493 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SNX3O60493 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SNX3O60493 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SNX3O60493 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.71■□□□□ 0.43
SNX3O60493 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX3O60493 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.71■□□□□ 0.43
SNX3O60493 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX3O60493 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.71■□□□□ 0.43
SNX3O60493 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SNX3O60493 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX3O60493 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms