Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SNAI2O43623 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.51□□□□□ -0.25
SNAI2O43623 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SNAI2O43623 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.51□□□□□ -0.25
SNAI2O43623 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.51□□□□□ -0.25
SNAI2O43623 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SNAI2O43623 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 AC098934.4-201ENST00000564127 592 ntBASIC13.51□□□□□ -0.25
SNAI2O43623 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.51□□□□□ -0.25
SNAI2O43623 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.51□□□□□ -0.25
SNAI2O43623 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SNAI2O43623 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SNAI2O43623 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SNAI2O43623 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.51□□□□□ -0.25
SNAI2O43623 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SNAI2O43623 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SNAI2O43623 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.5□□□□□ -0.25
SNAI2O43623 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.5□□□□□ -0.25
SNAI2O43623 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.5□□□□□ -0.25
SNAI2O43623 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
SNAI2O43623 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SNAI2O43623 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.5□□□□□ -0.25
SNAI2O43623 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.5□□□□□ -0.25
SNAI2O43623 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 AP000593.1-201ENST00000393668 712 ntBASIC13.5□□□□□ -0.25
SNAI2O43623 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC13.5□□□□□ -0.25
SNAI2O43623 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.5□□□□□ -0.25
SNAI2O43623 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.5□□□□□ -0.25
SNAI2O43623 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.5□□□□□ -0.25
SNAI2O43623 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.5□□□□□ -0.25
SNAI2O43623 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.5□□□□□ -0.25
SNAI2O43623 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.5□□□□□ -0.25
SNAI2O43623 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SNAI2O43623 AC131212.4-201ENST00000623606 975 ntBASIC13.5□□□□□ -0.25
SNAI2O43623 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.5□□□□□ -0.25
SNAI2O43623 AC133041.1-202ENST00000642053 222 ntBASIC13.5□□□□□ -0.25
SNAI2O43623 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SNAI2O43623 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SNAI2O43623 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
SNAI2O43623 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.5□□□□□ -0.25
SNAI2O43623 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC13.5□□□□□ -0.25
SNAI2O43623 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.5□□□□□ -0.25
SNAI2O43623 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SNAI2O43623 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.49□□□□□ -0.25
SNAI2O43623 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.49□□□□□ -0.25
SNAI2O43623 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNAI2O43623 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNAI2O43623 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.49□□□□□ -0.25
SNAI2O43623 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNAI2O43623 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNAI2O43623 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNAI2O43623 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SNAI2O43623 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNAI2O43623 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNAI2O43623 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SNAI2O43623 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNAI2O43623 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNAI2O43623 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNAI2O43623 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SNAI2O43623 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SNAI2O43623 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
SNAI2O43623 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNAI2O43623 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.49□□□□□ -0.25
SNAI2O43623 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.49□□□□□ -0.25
SNAI2O43623 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SNAI2O43623 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms