Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.67■□□□□ 0.1
XRCC2O43543 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
XRCC2O43543 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.67■□□□□ 0.1
XRCC2O43543 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 TERF1P1-201ENST00000311003 1181 ntBASIC15.67■□□□□ 0.1
XRCC2O43543 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
XRCC2O43543 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 RASA4DP-201ENST00000460726 1199 ntBASIC15.67■□□□□ 0.1
XRCC2O43543 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.67■□□□□ 0.1
XRCC2O43543 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
XRCC2O43543 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.67■□□□□ 0.1
XRCC2O43543 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
XRCC2O43543 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
XRCC2O43543 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 AC022898.2-201ENST00000616822 1312 ntBASIC15.67■□□□□ 0.1
XRCC2O43543 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.67■□□□□ 0.1
XRCC2O43543 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC2O43543 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.67■□□□□ 0.1
XRCC2O43543 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC2O43543 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC2O43543 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC2O43543 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.66■□□□□ 0.1
XRCC2O43543 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.66■□□□□ 0.1
XRCC2O43543 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC2O43543 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
XRCC2O43543 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
XRCC2O43543 KRT89P-201ENST00000620027 1478 ntBASIC15.66■□□□□ 0.1
XRCC2O43543 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC2O43543 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC2O43543 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.66■□□□□ 0.1
XRCC2O43543 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.66■□□□□ 0.1
XRCC2O43543 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
XRCC2O43543 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
XRCC2O43543 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.66■□□□□ 0.1
XRCC2O43543 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.66■□□□□ 0.1
XRCC2O43543 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.66■□□□□ 0.1
XRCC2O43543 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC2O43543 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.66■□□□□ 0.1
XRCC2O43543 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC2O43543 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
XRCC2O43543 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.66■□□□□ 0.1
XRCC2O43543 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.66■□□□□ 0.1
XRCC2O43543 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.66■□□□□ 0.1
XRCC2O43543 AC113404.2-201ENST00000507884 177 ntBASIC15.66■□□□□ 0.1
XRCC2O43543 DUTP2-201ENST00000519164 463 ntBASIC15.66■□□□□ 0.1
XRCC2O43543 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.66■□□□□ 0.1
XRCC2O43543 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.66■□□□□ 0.1
XRCC2O43543 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.66■□□□□ 0.1
XRCC2O43543 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
XRCC2O43543 LINC01023-201ENST00000606054 436 ntBASIC15.66■□□□□ 0.1
XRCC2O43543 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.66■□□□□ 0.1
XRCC2O43543 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC2O43543 KRT18P55-202ENST00000578578 1546 ntBASIC15.66■□□□□ 0.1
XRCC2O43543 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.66■□□□□ 0.1
XRCC2O43543 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC2O43543 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC2O43543 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC2O43543 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XRCC2O43543 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.66■□□□□ 0.1
XRCC2O43543 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
XRCC2O43543 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC2O43543 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC2O43543 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC2O43543 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
XRCC2O43543 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC2O43543 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC2O43543 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC2O43543 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC2O43543 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC2O43543 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC2O43543 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC2O43543 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.65■□□□□ 0.1
XRCC2O43543 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC2O43543 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.65■□□□□ 0.1
XRCC2O43543 STARP1-201ENST00000397973 869 ntBASIC15.65■□□□□ 0.1
XRCC2O43543 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.65■□□□□ 0.1
XRCC2O43543 AL441883.1-201ENST00000566170 1045 ntBASIC15.65■□□□□ 0.1
XRCC2O43543 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.65■□□□□ 0.1
XRCC2O43543 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
XRCC2O43543 AC024563.2-201ENST00000603282 481 ntBASIC15.65■□□□□ 0.1
XRCC2O43543 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC2O43543 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC2O43543 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
XRCC2O43543 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
XRCC2O43543 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.65■□□□□ 0.1
XRCC2O43543 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms