Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA2O43364 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA2O43364 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXA2O43364 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.2■□□□□ 0.66
HOXA2O43364 PRYP5-201ENST00000451909 266 ntBASIC19.2■□□□□ 0.66
HOXA2O43364 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA2O43364 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.2■□□□□ 0.66
HOXA2O43364 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.2■□□□□ 0.66
HOXA2O43364 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXA2O43364 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HOXA2O43364 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.2■□□□□ 0.66
HOXA2O43364 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.2■□□□□ 0.66
HOXA2O43364 MIR1199-201ENST00000621445 119 ntBASIC19.2■□□□□ 0.66
HOXA2O43364 AD001527.2-201ENST00000622994 785 ntBASIC19.2■□□□□ 0.66
HOXA2O43364 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HOXA2O43364 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXA2O43364 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA2O43364 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
HOXA2O43364 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXA2O43364 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA2O43364 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA2O43364 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HOXA2O43364 SIGLEC16-201ENST00000599858 1437 ntBASIC19.19■□□□□ 0.66
HOXA2O43364 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXA2O43364 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.19■□□□□ 0.66
HOXA2O43364 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXA2O43364 BX005266.1-201ENST00000473402 457 ntBASIC19.19■□□□□ 0.66
HOXA2O43364 PGAM5P1-201ENST00000518923 814 ntBASIC19.19■□□□□ 0.66
HOXA2O43364 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXA2O43364 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.19■□□□□ 0.66
HOXA2O43364 AL356488.2-201ENST00000602755 427 ntBASIC19.19■□□□□ 0.66
HOXA2O43364 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXA2O43364 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HOXA2O43364 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
HOXA2O43364 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA2O43364 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HOXA2O43364 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HOXA2O43364 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA2O43364 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA2O43364 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA2O43364 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA2O43364 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXA2O43364 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HOXA2O43364 AC010460.3-201ENST00000511359 1579 ntBASIC19.19■□□□□ 0.66
HOXA2O43364 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA2O43364 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
HOXA2O43364 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA2O43364 AC073592.3-201ENST00000625118 1834 ntBASIC19.18■□□□□ 0.66
HOXA2O43364 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXA2O43364 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA2O43364 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA2O43364 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA2O43364 AC126763.1-201ENST00000552015 2118 ntBASIC19.18■□□□□ 0.66
HOXA2O43364 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA2O43364 COX5BP2-201ENST00000392354 334 ntBASIC19.18■□□□□ 0.66
HOXA2O43364 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.18■□□□□ 0.66
HOXA2O43364 KRT18P3-201ENST00000451602 1288 ntBASIC19.18■□□□□ 0.66
HOXA2O43364 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.18■□□□□ 0.66
HOXA2O43364 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA2O43364 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA2O43364 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXA2O43364 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
HOXA2O43364 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.18■□□□□ 0.66
HOXA2O43364 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HOXA2O43364 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA2O43364 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.18■□□□□ 0.66
HOXA2O43364 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA2O43364 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA2O43364 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA2O43364 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXA2O43364 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
HOXA2O43364 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA2O43364 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA2O43364 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HOXA2O43364 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA2O43364 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA2O43364 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA2O43364 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA2O43364 PHGDH-209ENST00000641074 1780 ntBASIC19.17■□□□□ 0.66
HOXA2O43364 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA2O43364 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA2O43364 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA2O43364 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
HOXA2O43364 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.17■□□□□ 0.66
HOXA2O43364 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXA2O43364 UNC93B6-202ENST00000528242 690 ntBASIC19.17■□□□□ 0.66
HOXA2O43364 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXA2O43364 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXA2O43364 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXA2O43364 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
HOXA2O43364 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.17■□□□□ 0.66
HOXA2O43364 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA2O43364 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HOXA2O43364 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXA2O43364 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXA2O43364 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXA2O43364 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXA2O43364 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HOXA2O43364 KRT8P47-201ENST00000604727 1398 ntBASIC19.17■□□□□ 0.66
HOXA2O43364 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms