Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RRP8O43159 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
RRP8O43159 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RRP8O43159 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RRP8O43159 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RRP8O43159 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.88■□□□□ 0.29
RRP8O43159 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RRP8O43159 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.88■□□□□ 0.29
RRP8O43159 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 AC108751.1-201ENST00000490852 363 ntBASIC16.88■□□□□ 0.29
RRP8O43159 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.88■□□□□ 0.29
RRP8O43159 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
RRP8O43159 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.88■□□□□ 0.29
RRP8O43159 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RRP8O43159 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RRP8O43159 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RRP8O43159 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RRP8O43159 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RRP8O43159 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.87■□□□□ 0.29
RRP8O43159 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RRP8O43159 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RRP8O43159 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.87■□□□□ 0.29
RRP8O43159 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.87■□□□□ 0.29
RRP8O43159 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.87■□□□□ 0.29
RRP8O43159 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.87■□□□□ 0.29
RRP8O43159 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RRP8O43159 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RRP8O43159 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.87■□□□□ 0.29
RRP8O43159 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.87■□□□□ 0.29
RRP8O43159 COX20P2-201ENST00000452636 358 ntBASIC16.87■□□□□ 0.29
RRP8O43159 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RRP8O43159 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.87■□□□□ 0.29
RRP8O43159 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RRP8O43159 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.87■□□□□ 0.29
RRP8O43159 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.87■□□□□ 0.29
RRP8O43159 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.87■□□□□ 0.29
RRP8O43159 C20orf181-201ENST00000623918 480 ntBASIC16.87■□□□□ 0.29
RRP8O43159 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.87■□□□□ 0.29
RRP8O43159 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.87■□□□□ 0.29
RRP8O43159 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RRP8O43159 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RRP8O43159 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RRP8O43159 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.87■□□□□ 0.29
RRP8O43159 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.87■□□□□ 0.29
RRP8O43159 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
RRP8O43159 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RRP8O43159 IRX1P1-201ENST00000438849 1838 ntBASIC16.86■□□□□ 0.29
RRP8O43159 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
RRP8O43159 AC009102.3-201ENST00000623118 1491 ntBASIC16.86■□□□□ 0.29
RRP8O43159 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RRP8O43159 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RRP8O43159 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RRP8O43159 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RRP8O43159 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RRP8O43159 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RRP8O43159 TNXA-203ENST00000507684 2038 ntBASIC16.86■□□□□ 0.29
RRP8O43159 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.86■□□□□ 0.29
RRP8O43159 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.86■□□□□ 0.29
RRP8O43159 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RRP8O43159 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
RRP8O43159 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RRP8O43159 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RRP8O43159 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RRP8O43159 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.86■□□□□ 0.29
RRP8O43159 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.86■□□□□ 0.29
RRP8O43159 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RRP8O43159 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.86■□□□□ 0.29
RRP8O43159 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.86■□□□□ 0.29
RRP8O43159 AL022326.1-202ENST00000641533 845 ntBASIC16.86■□□□□ 0.29
RRP8O43159 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RRP8O43159 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RRP8O43159 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RRP8O43159 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RRP8O43159 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RRP8O43159 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RRP8O43159 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RRP8O43159 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RRP8O43159 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RRP8O43159 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.86■□□□□ 0.29
RRP8O43159 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RRP8O43159 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RRP8O43159 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RRP8O43159 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RRP8O43159 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms