Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.47■■□□□ 1.03
FOXN1O15353 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.47■■□□□ 1.03
FOXN1O15353 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FOXN1O15353 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXN1O15353 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.46■■□□□ 1.03
FOXN1O15353 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.46■■□□□ 1.03
FOXN1O15353 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.46■■□□□ 1.03
FOXN1O15353 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.46■■□□□ 1.03
FOXN1O15353 ALG1L5P-201ENST00000482043 771 ntBASIC21.46■■□□□ 1.03
FOXN1O15353 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC21.46■■□□□ 1.03
FOXN1O15353 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.46■■□□□ 1.03
FOXN1O15353 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.46■■□□□ 1.03
FOXN1O15353 AC005336.2-201ENST00000593183 939 ntBASIC21.46■■□□□ 1.03
FOXN1O15353 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.46■■□□□ 1.03
FOXN1O15353 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
FOXN1O15353 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
FOXN1O15353 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXN1O15353 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.46■■□□□ 1.03
FOXN1O15353 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.46■■□□□ 1.03
FOXN1O15353 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
FOXN1O15353 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXN1O15353 AL512353.2-201ENST00000448759 1962 ntBASIC21.45■■□□□ 1.02
FOXN1O15353 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
FOXN1O15353 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXN1O15353 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.45■■□□□ 1.02
FOXN1O15353 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FOXN1O15353 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXN1O15353 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXN1O15353 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.45■■□□□ 1.02
FOXN1O15353 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXN1O15353 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXN1O15353 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
FOXN1O15353 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FOXN1O15353 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.45■■□□□ 1.02
FOXN1O15353 MCCD1P2-201ENST00000423228 335 ntBASIC21.45■■□□□ 1.02
FOXN1O15353 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
FOXN1O15353 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FOXN1O15353 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.45■■□□□ 1.02
FOXN1O15353 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.45■■□□□ 1.02
FOXN1O15353 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.45■■□□□ 1.02
FOXN1O15353 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXN1O15353 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
FOXN1O15353 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.45■■□□□ 1.02
FOXN1O15353 AL353692.3-201ENST00000407031 1396 ntBASIC21.45■■□□□ 1.02
FOXN1O15353 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
FOXN1O15353 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXN1O15353 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXN1O15353 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXN1O15353 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXN1O15353 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXN1O15353 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXN1O15353 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
FOXN1O15353 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXN1O15353 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.44■■□□□ 1.02
FOXN1O15353 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.44■■□□□ 1.02
FOXN1O15353 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.44■■□□□ 1.02
FOXN1O15353 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.44■■□□□ 1.02
FOXN1O15353 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.44■■□□□ 1.02
FOXN1O15353 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.44■■□□□ 1.02
FOXN1O15353 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.44■■□□□ 1.02
FOXN1O15353 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.44■■□□□ 1.02
FOXN1O15353 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.44■■□□□ 1.02
FOXN1O15353 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.44■■□□□ 1.02
FOXN1O15353 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.44■■□□□ 1.02
FOXN1O15353 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXN1O15353 AC007613.1-201ENST00000572811 2597 ntBASIC21.44■■□□□ 1.02
FOXN1O15353 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.44■■□□□ 1.02
FOXN1O15353 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXN1O15353 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.44■■□□□ 1.02
FOXN1O15353 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.44■■□□□ 1.02
FOXN1O15353 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXN1O15353 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
FOXN1O15353 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXN1O15353 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FOXN1O15353 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXN1O15353 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXN1O15353 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FOXN1O15353 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXN1O15353 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXN1O15353 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXN1O15353 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXN1O15353 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.43■■□□□ 1.02
FOXN1O15353 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms