Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CUX2O14529 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC30.57■■■□□ 2.48
CUX2O14529 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CUX2O14529 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CUX2O14529 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC30.57■■■□□ 2.48
CUX2O14529 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC30.57■■■□□ 2.48
CUX2O14529 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CUX2O14529 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CUX2O14529 AL390754.1-201ENST00000619088 582 ntBASIC30.57■■■□□ 2.48
CUX2O14529 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CUX2O14529 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CUX2O14529 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CUX2O14529 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CUX2O14529 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC30.56■■■□□ 2.48
CUX2O14529 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CUX2O14529 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CUX2O14529 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC30.56■■■□□ 2.48
CUX2O14529 IGHV3OR16-6-201ENST00000568775 360 ntBASIC30.56■■■□□ 2.48
CUX2O14529 AP001059.3-201ENST00000619053 235 ntBASIC30.56■■■□□ 2.48
CUX2O14529 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC30.56■■■□□ 2.48
CUX2O14529 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC30.56■■■□□ 2.48
CUX2O14529 NFYC-AS1-201ENST00000606277 1687 ntBASIC30.56■■■□□ 2.48
CUX2O14529 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC30.56■■■□□ 2.48
CUX2O14529 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CUX2O14529 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC30.56■■■□□ 2.48
CUX2O14529 ADM-208ENST00000534464 1640 ntTSL 2 BASIC30.55■■■□□ 2.48
CUX2O14529 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC30.55■■■□□ 2.48
CUX2O14529 TUBB3P1-201ENST00000405796 1332 ntBASIC30.55■■■□□ 2.48
CUX2O14529 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
CUX2O14529 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC30.55■■■□□ 2.48
CUX2O14529 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
CUX2O14529 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CUX2O14529 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC30.55■■■□□ 2.48
CUX2O14529 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CUX2O14529 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CUX2O14529 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CUX2O14529 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
CUX2O14529 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC30.55■■■□□ 2.48
CUX2O14529 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC30.55■■■□□ 2.48
CUX2O14529 AL024508.2-201ENST00000607749 1894 ntBASIC30.55■■■□□ 2.48
CUX2O14529 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CUX2O14529 KRT8P47-201ENST00000604727 1398 ntBASIC30.55■■■□□ 2.48
CUX2O14529 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC30.55■■■□□ 2.48
CUX2O14529 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CUX2O14529 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CUX2O14529 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC30.54■■■□□ 2.48
CUX2O14529 AC004817.3-201ENST00000602957 2129 ntBASIC30.54■■■□□ 2.48
CUX2O14529 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CUX2O14529 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC30.54■■■□□ 2.48
CUX2O14529 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC30.54■■■□□ 2.48
CUX2O14529 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC30.54■■■□□ 2.48
CUX2O14529 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CUX2O14529 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC30.54■■■□□ 2.48
CUX2O14529 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
CUX2O14529 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC30.54■■■□□ 2.48
CUX2O14529 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC30.54■■■□□ 2.48
CUX2O14529 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
CUX2O14529 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CUX2O14529 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CUX2O14529 AC140878.1-201ENST00000565277 250 ntBASIC30.54■■■□□ 2.48
CUX2O14529 AL805961.1-202ENST00000641562 540 ntBASIC30.54■■■□□ 2.48
CUX2O14529 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC30.54■■■□□ 2.48
CUX2O14529 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CUX2O14529 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC30.54■■■□□ 2.48
CUX2O14529 FO538757.1-201ENST00000623083 1397 ntBASIC30.54■■■□□ 2.48
CUX2O14529 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CUX2O14529 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC30.54■■■□□ 2.48
CUX2O14529 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
CUX2O14529 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC30.54■■■□□ 2.48
CUX2O14529 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
CUX2O14529 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CUX2O14529 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC30.53■■■□□ 2.48
CUX2O14529 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CUX2O14529 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CUX2O14529 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC30.53■■■□□ 2.48
CUX2O14529 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC30.53■■■□□ 2.48
CUX2O14529 SERBP1P5-201ENST00000510079 1181 ntBASIC30.53■■■□□ 2.48
CUX2O14529 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC30.53■■■□□ 2.48
CUX2O14529 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC30.53■■■□□ 2.48
CUX2O14529 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC30.53■■■□□ 2.48
CUX2O14529 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC30.53■■■□□ 2.48
CUX2O14529 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
CUX2O14529 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
CUX2O14529 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
CUX2O14529 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC30.53■■■□□ 2.48
CUX2O14529 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC30.52■■■□□ 2.48
CUX2O14529 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CUX2O14529 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC30.52■■■□□ 2.48
CUX2O14529 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CUX2O14529 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC30.52■■■□□ 2.48
CUX2O14529 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CUX2O14529 MIR149-201ENST00000384879 89 ntBASIC30.52■■■□□ 2.48
CUX2O14529 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC30.52■■■□□ 2.48
CUX2O14529 AC125807.1-201ENST00000483097 614 ntBASIC30.52■■■□□ 2.48
CUX2O14529 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC30.52■■■□□ 2.48
CUX2O14529 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CUX2O14529 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CUX2O14529 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
CUX2O14529 CALY-202ENST00000368555 783 ntTSL 2 BASIC30.51■■■□□ 2.48
CUX2O14529 PIN1P1-201ENST00000412108 996 ntBASIC30.51■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms