Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NFKBIEO00221 AC069262.1-201ENST00000539058 672 ntBASIC21.61■■□□□ 1.05
NFKBIEO00221 AC190387.1-201ENST00000551683 408 ntBASIC21.61■■□□□ 1.05
NFKBIEO00221 Z92544.3-201ENST00000624747 417 ntBASIC21.61■■□□□ 1.05
NFKBIEO00221 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
NFKBIEO00221 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NFKBIEO00221 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NFKBIEO00221 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NFKBIEO00221 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NFKBIEO00221 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NFKBIEO00221 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NFKBIEO00221 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NFKBIEO00221 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NFKBIEO00221 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NFKBIEO00221 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NFKBIEO00221 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NFKBIEO00221 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NFKBIEO00221 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NFKBIEO00221 COX5BP2-201ENST00000392354 334 ntBASIC21.6■■□□□ 1.05
NFKBIEO00221 AC005034.1-201ENST00000426657 489 ntBASIC21.6■■□□□ 1.05
NFKBIEO00221 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.6■■□□□ 1.05
NFKBIEO00221 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.6■■□□□ 1.05
NFKBIEO00221 AC025678.2-201ENST00000562061 970 ntBASIC21.6■■□□□ 1.05
NFKBIEO00221 AC022145.2-201ENST00000598203 171 ntBASIC21.6■■□□□ 1.05
NFKBIEO00221 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.6■■□□□ 1.05
NFKBIEO00221 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NFKBIEO00221 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.6■■□□□ 1.05
NFKBIEO00221 AL049757.1-201ENST00000616842 1596 ntBASIC21.6■■□□□ 1.05
NFKBIEO00221 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NFKBIEO00221 AC007952.6-201ENST00000573168 2673 ntBASIC21.6■■□□□ 1.05
NFKBIEO00221 AC003957.1-201ENST00000625108 2673 ntBASIC21.6■■□□□ 1.05
NFKBIEO00221 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.6■■□□□ 1.05
NFKBIEO00221 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NFKBIEO00221 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.6■■□□□ 1.05
NFKBIEO00221 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NFKBIEO00221 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.59■■□□□ 1.05
NFKBIEO00221 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
NFKBIEO00221 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NFKBIEO00221 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NFKBIEO00221 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.59■■□□□ 1.05
NFKBIEO00221 AC015922.1-201ENST00000421102 1152 ntBASIC21.59■■□□□ 1.05
NFKBIEO00221 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.59■■□□□ 1.05
NFKBIEO00221 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.59■■□□□ 1.05
NFKBIEO00221 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.59■■□□□ 1.05
NFKBIEO00221 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.59■■□□□ 1.05
NFKBIEO00221 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.59■■□□□ 1.05
NFKBIEO00221 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.59■■□□□ 1.05
NFKBIEO00221 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.59■■□□□ 1.05
NFKBIEO00221 AC093520.2-201ENST00000561830 333 ntBASIC21.59■■□□□ 1.05
NFKBIEO00221 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NFKBIEO00221 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC21.59■■□□□ 1.05
NFKBIEO00221 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NFKBIEO00221 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.59■■□□□ 1.05
NFKBIEO00221 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NFKBIEO00221 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.59■■□□□ 1.05
NFKBIEO00221 AC093484.2-201ENST00000580996 2166 ntBASIC21.58■■□□□ 1.05
NFKBIEO00221 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
NFKBIEO00221 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.58■■□□□ 1.05
NFKBIEO00221 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NFKBIEO00221 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NFKBIEO00221 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NFKBIEO00221 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NFKBIEO00221 AC023141.5-201ENST00000458585 616 ntBASIC21.58■■□□□ 1.05
NFKBIEO00221 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.58■■□□□ 1.05
NFKBIEO00221 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NFKBIEO00221 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.58■■□□□ 1.05
NFKBIEO00221 LINC00628-201ENST00000628516 1289 ntBASIC21.58■■□□□ 1.05
NFKBIEO00221 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NFKBIEO00221 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.58■■□□□ 1.04
NFKBIEO00221 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.58■■□□□ 1.04
NFKBIEO00221 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.57■■□□□ 1.04
NFKBIEO00221 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NFKBIEO00221 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
NFKBIEO00221 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NFKBIEO00221 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NFKBIEO00221 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NFKBIEO00221 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NFKBIEO00221 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.57■■□□□ 1.04
NFKBIEO00221 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.57■■□□□ 1.04
NFKBIEO00221 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.57■■□□□ 1.04
NFKBIEO00221 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.57■■□□□ 1.04
NFKBIEO00221 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.57■■□□□ 1.04
NFKBIEO00221 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.57■■□□□ 1.04
NFKBIEO00221 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.57■■□□□ 1.04
NFKBIEO00221 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC21.57■■□□□ 1.04
NFKBIEO00221 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NFKBIEO00221 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.57■■□□□ 1.04
NFKBIEO00221 AJ011932.1-201ENST00000621707 465 ntBASIC21.57■■□□□ 1.04
NFKBIEO00221 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.57■■□□□ 1.04
NFKBIEO00221 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NFKBIEO00221 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NFKBIEO00221 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NFKBIEO00221 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NFKBIEO00221 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NFKBIEO00221 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NFKBIEO00221 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NFKBIEO00221 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.57■■□□□ 1.04
NFKBIEO00221 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NFKBIEO00221 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NFKBIEO00221 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms