Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4L1A6NKN8 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PCP4L1A6NKN8 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.03□□□□□ -0.16
PCP4L1A6NKN8 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.03□□□□□ -0.16
PCP4L1A6NKN8 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCP4L1A6NKN8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
PCP4L1A6NKN8 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCP4L1A6NKN8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCP4L1A6NKN8 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PCP4L1A6NKN8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PCP4L1A6NKN8 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.02□□□□□ -0.16
PCP4L1A6NKN8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PCP4L1A6NKN8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.02□□□□□ -0.16
PCP4L1A6NKN8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.02□□□□□ -0.16
PCP4L1A6NKN8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCP4L1A6NKN8 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PCP4L1A6NKN8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.02□□□□□ -0.16
PCP4L1A6NKN8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC14.02□□□□□ -0.16
PCP4L1A6NKN8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PCP4L1A6NKN8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PCP4L1A6NKN8 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
PCP4L1A6NKN8 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
PCP4L1A6NKN8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 AC073869.1-201ENST00000415574 2762 ntBASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 COL6A4P2-202ENST00000504443 2753 ntBASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.01□□□□□ -0.17
PCP4L1A6NKN8 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCP4L1A6NKN8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PCP4L1A6NKN8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4L1A6NKN8 PCDHA3-202ENST00000532566 4594 ntBASIC14□□□□□ -0.17
PCP4L1A6NKN8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4L1A6NKN8 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14□□□□□ -0.17
PCP4L1A6NKN8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCP4L1A6NKN8 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4L1A6NKN8 Z82170.1-201ENST00000625081 3192 ntBASIC14□□□□□ -0.17
PCP4L1A6NKN8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PCP4L1A6NKN8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCP4L1A6NKN8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14□□□□□ -0.17
PCP4L1A6NKN8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PCP4L1A6NKN8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PCP4L1A6NKN8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PCP4L1A6NKN8 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4L1A6NKN8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4L1A6NKN8 AC141586.3-201ENST00000562166 1838 ntBASIC14□□□□□ -0.17
PCP4L1A6NKN8 AC079089.2-201ENST00000531211 1277 ntBASIC14□□□□□ -0.17
PCP4L1A6NKN8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCP4L1A6NKN8 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PCP4L1A6NKN8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4L1A6NKN8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCP4L1A6NKN8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCP4L1A6NKN8 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCP4L1A6NKN8 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms