Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 SPDYE7P-202ENST00000420373 878 ntBASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 AC241585.1-201ENST00000433527 519 ntBASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 KRT18P65-201ENST00000439811 1286 ntBASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 KRT17P8-201ENST00000540749 863 ntBASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 TP53TG3HP-202ENST00000569755 579 ntBASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 MIR6787-201ENST00000616675 61 ntBASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 AC233723.2-201ENST00000623798 2106 ntBASIC19.79■□□□□ 0.76
CCDC85CA6NKD9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 PTCHD3P3-201ENST00000403073 906 ntBASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 INE1-201ENST00000456273 945 ntBASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 MIR4538-201ENST00000581377 78 ntBASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 AC003101.2-201ENST00000612557 442 ntBASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 AC068587.9-201ENST00000641814 219 ntBASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC85CA6NKD9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 AC022210.1-201ENST00000449856 793 ntBASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC85CA6NKD9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC85CA6NKD9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 Z82202.1-201ENST00000623446 1880 ntBASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 AC098614.1-201ENST00000368528 745 ntBASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 AC026150.2-201ENST00000564693 1156 ntBASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC85CA6NKD9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC85CA6NKD9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms