Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 TEX21P-204ENST00000641479 1693 ntBASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 Z83836.1-201ENST00000624605 1642 ntBASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 AL031598.1-201ENST00000561511 1773 ntBASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 MIR564-202ENST00000385049 94 ntBASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 AP003733.1-201ENST00000491725 852 ntBASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 AC090616.6-201ENST00000582640 721 ntBASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 AC034236.2-201ENST00000606662 1610 ntBASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBAL3A6NHL2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 TPSP2-201ENST00000561760 610 ntBASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 AC091304.2-201ENST00000564639 760 ntBASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 IFNL4P1-201ENST00000607083 540 ntBASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 FEM1AP3-201ENST00000403722 1741 ntBASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 AC006333.2-201ENST00000607957 2099 ntBASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TUBAL3A6NHL2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms