Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 AC108860.2-201ENST00000562760 2183 ntBASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 AC012313.1-201ENST00000593393 3059 ntBASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEF25A6NGN4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
PRAMEF25A6NGN4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PRAMEF25A6NGN4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.89■□□□□ 0.3
PRAMEF25A6NGN4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.89■□□□□ 0.3
PRAMEF25A6NGN4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.3
PRAMEF25A6NGN4 AC080080.1-201ENST00000625121 2420 ntBASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 BCL2-203ENST00000589955 5011 ntBASIC16.89■□□□□ 0.29
PRAMEF25A6NGN4 AC093010.1-201ENST00000473625 1624 ntBASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 AC009102.3-201ENST00000623118 1491 ntBASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 MIR149-201ENST00000384879 89 ntBASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 AC112907.2-201ENST00000448639 330 ntBASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEF25A6NGN4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 AL671277.2-201ENST00000458060 996 ntBASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 KRT18P35-201ENST00000510488 1269 ntBASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 AC087388.1-201ENST00000571370 1112 ntBASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRAMEF25A6NGN4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms