Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRIT2A6NDA9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 AC068880.1-201ENST00000507289 2297 ntBASIC17.12■□□□□ 0.33
LRIT2A6NDA9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LRIT2A6NDA9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 AC112698.1-201ENST00000510299 916 ntBASIC17.11■□□□□ 0.33
LRIT2A6NDA9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 IER3-202ENST00000376377 1350 ntBASIC17.11■□□□□ 0.33
LRIT2A6NDA9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRIT2A6NDA9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 MTCL1P1-201ENST00000446207 792 ntBASIC17.1■□□□□ 0.33
LRIT2A6NDA9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 GUSBP12-201ENST00000513727 720 ntBASIC17.1■□□□□ 0.33
LRIT2A6NDA9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 AC090616.6-201ENST00000582640 721 ntBASIC17.1■□□□□ 0.33
LRIT2A6NDA9 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 AL358472.4-201ENST00000633140 710 ntBASIC17.1■□□□□ 0.33
LRIT2A6NDA9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRIT2A6NDA9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms