Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 AC098818.2-201ENST00000564925 2320 ntBASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 MRPL3P1-201ENST00000400109 1033 ntBASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 RBM17P3-201ENST00000417687 1192 ntBASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 FAM197Y8-203ENST00000450145 560 ntBASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
TRGV5A0A0B4J1U4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 AF186996.4-201ENST00000467186 377 ntBASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 DUTP2-201ENST00000519164 463 ntBASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 MTDHP3-201ENST00000594186 672 ntBASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 AL355877.3-201ENST00000622820 899 ntBASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 TP73-AS1-207ENST00000624167 988 ntBASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 AC097374.2-201ENST00000618617 1306 ntBASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV5A0A0B4J1U4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 AC093503.3-201ENST00000624917 2352 ntBASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 TNXA-203ENST00000507684 2038 ntBASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV5A0A0B4J1U4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms